Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF379 and GFF380 overlap by 11 nucleotidesGFF380 and GFF381 are separated by 10 nucleotidesGFF381 and GFF382 are separated by 30 nucleotidesGFF382 and GFF383 are separated by 5 nucleotides GFF379 - Ribonuclease HII (EC 3.1.26.4), at 411,111 to 411,821 GFF379 GFF380 - Lipid-A-disaccharide synthase (EC 2.4.1.182), at 411,811 to 412,959 GFF380 GFF381 - Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam ine O-acyltransferase (EC 2.3.1.129), at 412,970 to 413,758 GFF381 GFF382 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59), at 413,789 to 414,256 GFF382 GFF383 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.191), at 414,262 to 415,239 GFF383
Group Condition GFF379 GFF380 GFF381 GFF382 GFF383
complex community Community=Locust bean gum; Passage=4 -1.0 N.D. N.D. N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.7 N.D. N.D. N.D. N.D.
phage phage_bap4 -0.4 N.D. N.D. N.D. N.D.
complex community Community=guar; Passage=4 -0.4 N.D. N.D. N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.4 N.D. N.D. N.D. N.D.
phage phage_bap4 -0.4 N.D. N.D. N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.4 N.D. N.D. N.D. N.D.
phage phage_bap4 -0.3 N.D. N.D. N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus -0.3 N.D. N.D. N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 N.D. N.D. N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 N.D. N.D. N.D. N.D.
phage phage_bap4 -0.2 N.D. N.D. N.D. N.D.
phage phage_bap4 -0.2 N.D. N.D. N.D. N.D.
complex community Community=arabino-guar; Passage=4 +0.2 N.D. N.D. N.D. N.D.
phage phage_bap4 +0.2 N.D. N.D. N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 N.D. N.D. N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 N.D. N.D. N.D. N.D.
complex community Community=guar; Passage=4 +0.2 N.D. N.D. N.D. N.D.
no phage control no phage control +0.2 N.D. N.D. N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus +0.2 N.D. N.D. N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus +0.2 N.D. N.D. N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.3 N.D. N.D. N.D. N.D.
complex community Community=Locust bean gum; Passage=4 +0.3 N.D. N.D. N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.3 N.D. N.D. N.D. N.D.
complex community Community=Kojac gum; Passage=1 +0.5 N.D. N.D. N.D. N.D.
complex community Community=Locust bean gum; Passage=4 +0.5 N.D. N.D. N.D. N.D.
complex community Community=Locust bean gum; Passage=4 +0.6 N.D. N.D. N.D. N.D.
complex community Community=arabino-guar; Passage=4 +0.6 N.D. N.D. N.D. N.D.
complex community Community=Kojac gum; Passage=4 +0.7 N.D. N.D. N.D. N.D.
complex community Community=guar; Passage=4 +1.0 N.D. N.D. N.D. N.D.
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