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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF3784 and GFF3785 are separated by 185 nucleotides
GFF3785 and GFF3786 are separated by 206 nucleotides
GFF3786 and GFF3787 are separated by 84 nucleotides
GFF3787 and GFF3788 are separated by 19 nucleotides
GFF3784 - hypothetical protein, at 3,826,677 to 3,826,931
GFF3784
GFF3785 - Efflux ABC transporter, ATP-binding protein, at 3,827,117 to 3,828,046
GFF3785
GFF3786 - hypothetical protein, at 3,828,253 to 3,828,540
GFF3786
GFF3787 - RidA/YER057c/UK114 superfamily protein, at 3,828,625 to 3,829,062
GFF3787
GFF3788 - Cysteine desulfurase (EC 2.8.1.7), at 3,829,082 to 3,830,341
GFF3788
Group
Condition
GFF3784
GFF3785
GFF3786
GFF3787
GFF3788
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-1.5
-0.6
-0.7
+0.3
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-1.1
-0.3
-0.1
-0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.6
+0.0
-0.5
-0.4
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.5
-0.2
-0.4
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.4
-0.1
+0.4
-0.8
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.4
-0.0
-0.2
-0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.5
-0.2
+0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-1.0
-0.0
-0.1
+0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.3
-0.3
+0.1
-0.2
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.4
-0.1
-0.2
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.5
-0.2
+0.1
-0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
-0.3
-0.1
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.3
-0.3
+0.2
-0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.5
-0.1
+0.3
-0.2
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.2
-0.2
+0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
-0.1
+0.0
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.4
-0.1
+0.4
-0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.0
+0.4
-0.1
-0.0
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