Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3774 and GFF3775 overlap by 4 nucleotidesGFF3775 and GFF3776 are separated by 167 nucleotidesGFF3776 and GFF3777 are separated by 6 nucleotidesGFF3777 and GFF3778 are separated by 200 nucleotides GFF3774 - hypothetical protein, at 265,400 to 266,797 GFF3774 GFF3775 - Two-component transcriptional response regulator, OmpR family, at 266,794 to 267,468 GFF3775 GFF3776 - no description, at 267,636 to 268,025 GFF3776 GFF3777 - Prolyl endopeptidase (EC 3.4.21.26), at 268,032 to 270,083 GFF3777 GFF3778 - Wax ester synthase/acyl-CoA:diacylglycerol acyltransferase, at 270,284 to 271,984 GFF3778
Group Condition GFF3774 GFF3775 GFF3776 GFF3777 GFF3778
complex community Community=Locust bean gum; Passage=4 -0.4 +0.1 -2.1 -0.1 -0.1
complex community Community=guar; Passage=4 +0.1 -0.7 -0.4 -0.5 -0.1
complex community Community=guar; Passage=4 -0.2 -0.6 -0.5 +0.2 +0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 -0.4 -0.4 -0.1 -0.1
phage phage_bap4 +0.1 -0.3 -0.6 -0.1 -0.1
phage phage_bap4 -0.3 -0.2 -0.4 +0.1 -0.1
no phage control no phage control -0.0 -0.3 -0.6 +0.0 -0.0
no phage control no phage control +0.3 -0.2 -0.5 +0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.6 -0.7 -0.6 +0.2 +0.1
complex community Community=Kojac gum; Passage=4 +0.1 -0.6 +0.0 +0.4 -0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.4 -0.2 -0.3 -0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 -0.5 +0.3 +0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.3 -0.5 +0.2 +0.1 +0.1
complex community Community=guar; Passage=4 -0.7 +0.6 +0.0 +0.1 +0.2
complex community Community=arabino-guar; Passage=4 +0.3 -0.4 -0.0 +0.4 -0.0
complex community Community=arabino-guar; Passage=4 -0.4 +0.3 +0.2 +0.1 +0.0
complex community Community=Locust bean gum; Passage=1 -0.3 +0.0 +0.5 +0.0 +0.1
complex community Community=Locust bean gum; Passage=4 +0.7 +0.4 -0.1 -0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 +0.4 -0.2 +0.2 +0.2
complex community Community=Locust bean gum; Passage=4 +0.4 +0.4 -0.3 +0.0 +0.0
complex community Community=guar; Passage=4 +0.3 +0.0 -0.1 +0.2 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 +0.2 +0.1 +0.2 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.3 +0.6 -0.1 +0.0 +0.1
complex community Community=arabino-guar; Passage=4 +0.5 +0.1 +0.5 +0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL +0.4 +0.1 +0.2 +0.2 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.2 +0.4 +0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 +0.4 +0.3 +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.4 +0.7 -0.1 +0.2 +0.0
complex community Community=arabino-guar; Passage=4 +0.5 +0.5 +0.5 +0.1 -0.3
complex community Community=Locust bean gum; Passage=4 +0.5 +0.2 +0.5 +0.2 +0.0
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