Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF375 and GFF376 are separated by 8 nucleotidesGFF376 and GFF377 overlap by 8 nucleotidesGFF377 and GFF378 are separated by 140 nucleotidesGFF378 and GFF379 are separated by 7 nucleotides GFF375 - hypothetical protein, at 404,859 to 405,728 GFF375 GFF376 - Carbamoyl-phosphate synthase large chain (EC 6.3.5.5), at 405,737 to 408,985 GFF376 GFF377 - Carbamoyl-phosphate synthase small chain (EC 6.3.5.5), at 408,978 to 410,177 GFF377 GFF378 - RNA (nucleoside 2'-O)-methyltransferase, at 410,318 to 411,103 GFF378 GFF379 - Ribonuclease HII (EC 3.1.26.4), at 411,111 to 411,821 GFF379
Group Condition GFF375 GFF376 GFF377 GFF378 GFF379
complex community Community=Locust bean gum; Passage=4 +0.1 N.D. N.D. -3.7 -1.0
complex community Community=Locust bean gum; Passage=4 -0.0 N.D. N.D. -3.3 +0.3
phage phage_bap4 -0.7 N.D. N.D. -1.4 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 N.D. N.D. -0.7 -0.7
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 N.D. N.D. -1.1 -0.2
phage phage_bap4 -0.5 N.D. N.D. -0.7 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 N.D. N.D. -0.7 -0.0
phage phage_bap4 -0.0 N.D. N.D. -1.1 +0.2
phage phage_bap4 -0.5 N.D. N.D. -0.1 -0.2
phage phage_bap4 -0.6 N.D. N.D. +0.3 -0.4
phage phage_bap4 -0.5 N.D. N.D. -0.5 +0.2
phage phage_bap4 -0.3 N.D. N.D. -0.4 +0.1
phage phage_bap4 -0.7 N.D. N.D. +0.0 +0.0
phage phage_bap4 -0.4 N.D. N.D. -0.3 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 N.D. N.D. -0.5 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 N.D. N.D. +0.2 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL -0.0 N.D. N.D. -0.4 +0.3
complex community Community=guar; Passage=4 +0.3 N.D. N.D. -0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 N.D. N.D. +0.4 -0.2
complex community Community=Kojac gum; Passage=1 +0.2 N.D. N.D. -0.5 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 N.D. N.D. +0.5 +0.0
complex community Community=arabino-guar; Passage=4 +0.3 N.D. N.D. -0.4 +0.6
complex community Community=guar; Passage=4 -0.2 N.D. N.D. -0.2 +1.0
vitamin M9 with Supernatant from Cyptococcus +0.0 N.D. N.D. +0.6 +0.2
complex community Community=arabino-guar; Passage=4 -0.2 N.D. N.D. +1.0 +0.2
complex community Community=guar; Passage=4 +0.1 N.D. N.D. +1.2 -0.4
complex community Community=Kojac gum; Passage=4 -0.0 N.D. N.D. +0.5 +0.7
complex community Community=arabino-guar; Passage=4 +0.0 N.D. N.D. +1.6 -0.1
complex community Community=Locust bean gum; Passage=4 +0.6 N.D. N.D. +0.8 +0.6
complex community Community=Locust bean gum; Passage=4 +0.5 N.D. N.D. +1.0 +0.5
remove
GFF375
plot		 remove
GFF376
plot		 remove
GFF377		 remove
GFF378
plot		 remove
GFF379
plot