Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF374 and GFF375 are separated by 66 nucleotidesGFF375 and GFF376 are separated by 8 nucleotidesGFF376 and GFF377 overlap by 8 nucleotidesGFF377 and GFF378 are separated by 140 nucleotides GFF374 - Transcription elongation factor GreA, at 404,316 to 404,792 GFF374 GFF375 - hypothetical protein, at 404,859 to 405,728 GFF375 GFF376 - Carbamoyl-phosphate synthase large chain (EC 6.3.5.5), at 405,737 to 408,985 GFF376 GFF377 - Carbamoyl-phosphate synthase small chain (EC 6.3.5.5), at 408,978 to 410,177 GFF377 GFF378 - RNA (nucleoside 2'-O)-methyltransferase, at 410,318 to 411,103 GFF378
Group Condition GFF374 GFF375 GFF376 GFF377 GFF378
complex community Community=Locust bean gum; Passage=4 -1.0 -0.0 N.D. N.D. -3.3
complex community Community=Kojac gum; Passage=4 -4.6 -0.0 N.D. N.D. +0.5
complex community Community=Locust bean gum; Passage=4 -0.5 +0.1 N.D. N.D. -3.7
complex community Community=arabino-guar; Passage=4 -4.2 +0.2 N.D. N.D. +0.4
complex community Community=guar; Passage=4 -2.5 +0.3 N.D. N.D. -0.4
complex community Community=guar; Passage=4 -2.1 -0.2 N.D. N.D. -0.2
complex community Community=arabino-guar; Passage=4 -2.9 -0.2 N.D. N.D. +1.0
complex community Community=Locust bean gum; Passage=4 -3.5 +0.6 N.D. N.D. +0.8
phage phage_bap4 +0.0 -0.7 N.D. N.D. -1.4
complex community Community=guar; Passage=4 -2.0 +0.3 N.D. N.D. -0.1
complex community Community=arabino-guar; Passage=4 -1.4 +0.3 N.D. N.D. -0.4
phage phage_bap4 -0.4 -0.0 N.D. N.D. -1.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 +0.0 N.D. N.D. -1.1
phage phage_bap4 -0.0 -0.5 N.D. N.D. -0.7
complex community Community=guar; Passage=4 -2.5 +0.1 N.D. N.D. +1.2
phage phage_bap4 -0.1 -0.5 N.D. N.D. -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.6 -0.0 N.D. N.D. -0.4
vitamin M9 with Supernatant from Cyptococcus -0.3 -0.1 N.D. N.D. -0.5
phage phage_bap4 -0.2 -0.3 N.D. N.D. -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 -0.0 N.D. N.D. -0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.5 -0.2 N.D. N.D. -0.7
complex community Community=Locust bean gum; Passage=4 -1.9 +0.5 N.D. N.D. +1.0
phage phage_bap4 +0.2 -0.5 N.D. N.D. -0.1
phage phage_bap4 +0.2 -0.6 N.D. N.D. +0.3
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.4 -0.1 N.D. N.D. +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.5 -0.1 N.D. N.D. +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.6 -0.1 N.D. N.D. +0.4
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.6 -0.1 N.D. N.D. +0.3
vitamin M9 with Supernatant from Cyptococcus +0.3 +0.0 N.D. N.D. +0.6
complex community Community=arabino-guar; Passage=4 -0.4 +0.0 N.D. N.D. +1.6
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