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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF3756 and GFF3757 overlap by 4 nucleotides
GFF3757 and GFF3758 are separated by 193 nucleotides
GFF3758 and GFF3759 are separated by 11 nucleotides
GFF3759 and GFF3760 are separated by 14 nucleotides
GFF3756 - Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3), at 3,794,965 to 3,795,840
GFF3756
GFF3757 - 'tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207)' transl_table=11, at 3,795,837 to 3,796,295
GFF3757
GFF3758 - Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2), at 3,796,489 to 3,797,055
GFF3758
GFF3759 - Ubiquinol-cytochrome C reductase, cytochrome B subunit (EC 1.10.2.2), at 3,797,067 to 3,798,359
GFF3759
GFF3760 - Ubiquinol-cytochrome C reductase, cytochrome C1 subunit, at 3,798,374 to 3,799,222
GFF3760
Group
Condition
GFF3756
GFF3757
GFF3758
GFF3759
GFF3760
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
-0.2
-0.9
-0.7
-1.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
-0.2
-0.8
-0.8
-0.9
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
-0.2
-0.6
-0.7
-0.9
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
-0.2
-0.3
-0.6
-0.7
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
+0.3
-0.7
-0.7
-0.8
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
+0.2
-0.6
-0.7
-0.7
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
-0.5
-0.5
-0.5
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
-0.7
+0.1
-0.1
+0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
-0.0
-0.2
+0.0
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
-0.1
+0.0
-0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
+0.1
-0.1
+0.0
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
-0.1
+0.1
+0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
+0.1
+0.1
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
-0.0
+0.1
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
+0.0
+0.0
+0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
+0.0
+0.1
+0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
+0.0
+0.1
+0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
-0.0
+0.0
+0.1
+0.2
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