Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3746 and GFF3747 overlap by 4 nucleotidesGFF3747 and GFF3748 are separated by 7 nucleotidesGFF3748 and GFF3749 are separated by 72 nucleotidesGFF3749 and GFF3750 overlap by 4 nucleotides GFF3746 - Probable NADH dehydrogenase/NAD(P)H nitroreductase, at 241,824 to 242,414 GFF3746 GFF3747 - putative esterase, at 242,411 to 243,253 GFF3747 GFF3748 - KEGG: dihydrodipicolinate synthase , at 243,261 to 244,118 GFF3748 GFF3749 - ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate), at 244,191 to 244,997 GFF3749 GFF3750 - no description, at 244,994 to 245,395 GFF3750
Group Condition GFF3746 GFF3747 GFF3748 GFF3749 GFF3750
vitamin M9 with Supernatant from Cyptococcus +0.0 -0.0 +0.1 -2.8 +0.0
complex community Community=arabino-guar; Passage=4 -0.2 +0.3 +0.5 -2.1 -0.1
phage phage_bap4 -0.6 +0.0 -0.2 -1.0 +0.0
complex community Community=Locust bean gum; Passage=4 +0.6 -0.7 -0.1 -1.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 +0.1 -0.2 -0.6 -0.1
no phage control no phage control +0.2 +0.0 +0.0 -1.2 +0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.4 +0.0 -0.2 -1.0 -0.1
phage phage_bap4 +0.2 +0.1 -0.1 -0.8 +0.2
complex community Community=Locust bean gum; Passage=4 -0.2 +0.4 -0.3 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.3 +0.1 -0.8 -0.0
complex community Community=guar; Passage=4 -0.3 +0.4 -0.3 -0.1 +0.1
complex community Community=arabino-guar; Passage=4 +0.6 +0.3 -0.7 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.5 +0.1 -0.0 -0.6 +0.1
complex community Community=guar; Passage=4 -0.2 +0.6 -0.3 +0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 +0.1 +0.0 +0.4 -0.3
complex community Community=arabino-guar; Passage=4 +0.4 +0.3 -0.3 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.2 +0.0 +0.8 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.6 +0.0 -0.0 +0.4 -0.3
complex community Community=arabino-guar; Passage=4 +0.3 -0.0 +0.7 -0.4 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 +0.1 -0.0 +0.6 -0.3
complex community Community=guar; Passage=4 +0.2 -0.1 +0.3 -0.2 +0.5
complex community Community=Kojac gum; Passage=4 -0.0 -0.3 +0.1 +1.0 +0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.6 +0.2 +0.0 +0.2 -0.2
vitamin M9 with Supernatant from Cyptococcus +0.3 +0.0 +0.1 +0.7 -0.2
complex community Community=guar; Passage=4 -0.0 -0.2 +0.1 +0.7 +0.3
vitamin M9 with Supernatant from Cyptococcus +0.5 -0.1 -0.2 +0.8 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.5 +0.1 -0.2 +0.5 -0.0
complex community Community=Locust bean gum; Passage=4 +0.6 +0.1 +0.2 +0.2 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.6 -0.0 -0.1 +1.2 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.7 +0.2 +0.2 +0.3 +0.2
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