Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3741 and GFF3742 overlap by 4 nucleotidesGFF3742 and GFF3743 are separated by 32 nucleotidesGFF3743 and GFF3744 are separated by 51 nucleotidesGFF3744 and GFF3745 are separated by 25 nucleotides GFF3741 - Uncharacterized MFS-type transporter, at 236,535 to 238,085 GFF3741 GFF3742 - Type IV pilus assembly ATPase component PilU, at 238,082 to 239,218 GFF3742 GFF3743 - Twitching motility protein PilT, at 239,251 to 240,294 GFF3743 GFF3744 - Pyridoxal phosphate-containing protein YggS, at 240,346 to 241,047 GFF3744 GFF3745 - Uncharacterized UPF0721 integral membrane protein, at 241,073 to 241,813 GFF3745
Group Condition GFF3741 GFF3742 GFF3743 GFF3744 GFF3745
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 N.D. -0.5 N.D. -0.2
complex community Community=Locust bean gum; Passage=1 -0.1 N.D. -0.7 N.D. +0.1
complex community Community=Kojac gum; Passage=1 +0.0 N.D. -0.7 N.D. +0.0
complex community Community=Locust bean gum; Passage=4 -0.2 N.D. -0.4 N.D. -0.0
complex community Community=Locust bean gum; Passage=4 -0.1 N.D. -0.7 N.D. +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 N.D. -0.3 N.D. -0.3
complex community Community=Locust bean gum; Passage=4 -0.1 N.D. -0.4 N.D. +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 N.D. -0.5 N.D. +0.1
complex community Community=guar; Passage=4 -0.1 N.D. -0.8 N.D. +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 N.D. -0.6 N.D. +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 N.D. -0.5 N.D. +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 N.D. -0.4 N.D. +0.2
complex community Community=guar; Passage=4 +0.0 N.D. -0.7 N.D. +0.3
complex community Community=Kojac gum; Passage=4 +0.1 N.D. -0.7 N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 N.D. -0.4 N.D. -0.0
complex community Community=guar; Passage=4 +0.3 N.D. -0.5 N.D. +0.1
complex community Community=Locust bean gum; Passage=4 +0.5 N.D. -0.9 N.D. +0.5
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 N.D. +0.3 N.D. +0.1
vitamin M9 with Supernatant from Cyptococcus +0.2 N.D. +0.3 N.D. -0.1
complex community Community=arabino-guar; Passage=4 +0.3 N.D. +0.4 N.D. -0.1
complex community Community=arabino-guar; Passage=4 -0.3 N.D. +0.2 N.D. +0.7
complex community Community=arabino-guar; Passage=4 +0.1 N.D. +0.6 N.D. +0.3
phage phage_bap4 +0.1 N.D. +1.0 N.D. +0.4
phage phage_bap4 -0.1 N.D. +1.5 N.D. -0.0
phage phage_bap4 +0.1 N.D. +1.4 N.D. -0.0
phage phage_bap4 +0.0 N.D. +1.5 N.D. +0.3
phage phage_bap4 -0.1 N.D. +4.4 N.D. +0.0
phage phage_bap4 -0.1 N.D. +4.5 N.D. -0.1
phage phage_bap4 -0.1 N.D. +4.4 N.D. +0.1
phage phage_bap4 -0.0 N.D. +4.5 N.D. +0.1
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