Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_19080	PS417_19085	PS417_19090	PS417_19095	PS417_19100
rhizosphere	rhizosphere sample 1; outgrowth in LB	N.D.	+0.0	-0.5	-3.1	N.D.
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	N.D.	-0.2	-0.1	-3.0	N.D.
carbon source	Carbon source D-Mannitol 2.5 mM	N.D.	-0.8	-0.8	-1.5	N.D.
carbon source	Carbon source D-Mannitol 5 mM	N.D.	-0.4	-0.2	-1.7	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.3	-0.0	-2.0	N.D.
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	N.D.	-0.0	-0.2	-2.1	N.D.
carbon source	Carbon source D-Mannitol 2.5 mM	N.D.	-0.4	-0.2	-1.6	N.D.
seeds	Growth on radish seeds for 72 hours	N.D.	-0.6	-0.4	-1.3	N.D.
stress	Nalidixic 0.015 mg/ml	N.D.	-0.1	-0.2	-1.8	N.D.
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	+0.1	-0.7	-1.6	N.D.
phage	P. simiae Grant Run MOI 0.1	N.D.	-0.0	-0.0	-2.1	N.D.
carbon source	2'-Deoxyinosine 5 mM (C)	N.D.	+0.1	-0.1	-2.1	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.2	-1.0	-0.9	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.1	-1.4	-0.6	N.D.
phage	P. simiae OR Antrim MOI 0.1	N.D.	+0.3	-0.3	-1.5	N.D.
carbon source	2'-Deoxyinosine 5 mM (C)	N.D.	+0.0	+0.4	-1.9	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.3	+0.5	-2.2	N.D.
soil	soil sample 3; outgrowth in LB	N.D.	-0.8	-0.9	+0.5	N.D.
phage	P. simiae ORA MOI 0.1	N.D.	-1.1	-0.5	+0.6	N.D.
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	+0.6	-0.4	-0.9	N.D.
phage	P. simiae Grant Run MOI 10	N.D.	-0.0	+0.9	-1.6	N.D.
motility	inner cut, LB soft agar motility assay	N.D.	+0.5	+0.4	-1.4	N.D.
stress	methylglyoxal 0.032 vol%	N.D.	+0.3	+1.4	-2.0	N.D.
soil	soil sample 5; outgrowth in LB	N.D.	-1.0	+1.0	+0.2	N.D.
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	N.D.	+1.1	+0.4	-1.2	N.D.
phage	P. simiae OR Antrim MOI 1	N.D.	-0.3	-0.5	+1.9	N.D.
nophagecontrol	Only library	N.D.	-0.4	-0.3	+1.7	N.D.
carbon source	L-Valine (C)	N.D.	-0.0	-0.5	+1.9	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB	N.D.	-0.2	+0.7	+1.2	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.1	+0.4	+2.0	N.D.