Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3727 and GFF3728 are separated by 168 nucleotidesGFF3728 and GFF3729 are separated by 27 nucleotidesGFF3729 and GFF3730 are separated by 119 nucleotidesGFF3730 and GFF3731 are separated by 76 nucleotides GFF3727 - Transcriptional regulator, AcrR family, at 226,520 to 227,161 GFF3727 GFF3728 - no description, at 227,330 to 227,557 GFF3728 GFF3729 - Transcriptional regulator, AraC family, at 227,585 to 228,352 GFF3729 GFF3730 - Integral membrane protein, at 228,472 to 229,290 GFF3730 GFF3731 - Glutathione S-transferase, at 229,367 to 230,095 GFF3731
Group Condition GFF3727 GFF3728 GFF3729 GFF3730 GFF3731
complex community Community=arabino-guar; Passage=4 -0.8 N.D. -0.3 -0.1 -0.6
complex community Community=arabino-guar; Passage=4 -1.1 N.D. -0.4 +0.3 -0.4
complex community Community=guar; Passage=4 -0.9 N.D. -0.6 +0.1 -0.3
complex community Community=Locust bean gum; Passage=4 -0.9 N.D. -1.1 +0.2 +0.4
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.8 N.D. -0.0 -0.2 -0.3
complex community Community=guar; Passage=4 -1.1 N.D. +0.0 +0.1 -0.3
complex community Community=guar; Passage=4 -1.2 N.D. -0.5 -0.1 +0.5
complex community Community=guar; Passage=4 -0.5 N.D. -0.3 -0.1 -0.2
phage phage_bap4 -0.2 N.D. -0.7 -0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 N.D. -0.4 -0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.5 N.D. +0.0 -0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.6 N.D. -0.4 +0.1 +0.1
complex community Community=Kojac gum; Passage=4 +0.3 N.D. -1.3 +0.5 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 N.D. -0.4 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.4 N.D. +0.3 -0.3 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 N.D. -0.3 -0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.4 N.D. +0.0 +0.2 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.6 N.D. +0.0 -0.1 +0.2
complex community Community=Locust bean gum; Passage=4 -0.9 N.D. -0.0 +0.7 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.4 N.D. +0.1 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 N.D. -0.1 +0.4 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.5 N.D. +0.1 +0.1 +0.1
no phage control no phage control -0.3 N.D. +0.2 +0.1 +0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.4 N.D. +0.5 +0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 N.D. +0.4 +0.1 -0.0
complex community Community=arabino-guar; Passage=4 -0.2 N.D. +0.3 +0.4 -0.1
complex community Community=arabino-guar; Passage=4 -0.8 N.D. +0.6 +0.0 +0.5
phage phage_bap4 -0.2 N.D. +0.5 -0.1 +0.2
complex community Community=Locust bean gum; Passage=4 -1.2 N.D. +0.7 +0.6 +0.5
complex community Community=Locust bean gum; Passage=4 -0.2 N.D. +0.0 +0.9 +0.7
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