Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3724 and GFF3725 overlap by 8 nucleotidesGFF3725 and GFF3726 are separated by 18 nucleotidesGFF3726 and GFF3727 are separated by 206 nucleotidesGFF3727 and GFF3728 are separated by 168 nucleotides GFF3724 - Efflux transport system, outer membrane factor (OMF) lipoprotein, at 220,445 to 221,872 GFF3724 GFF3725 - RND efflux system, inner membrane transporter, at 221,865 to 225,029 GFF3725 GFF3726 - RND efflux system, membrane fusion protein, at 225,048 to 226,313 GFF3726 GFF3727 - Transcriptional regulator, AcrR family, at 226,520 to 227,161 GFF3727 GFF3728 - no description, at 227,330 to 227,557 GFF3728
Group Condition GFF3724 GFF3725 GFF3726 GFF3727 GFF3728
complex community Community=Locust bean gum; Passage=4 -1.2 +0.2 -0.1 -1.2 N.D.
complex community Community=guar; Passage=4 -0.6 +0.1 -0.0 -1.1 N.D.
complex community Community=arabino-guar; Passage=4 -0.3 -0.2 +0.1 -1.1 N.D.
complex community Community=guar; Passage=4 -0.6 -0.3 +0.1 -0.5 N.D.
complex community Community=Locust bean gum; Passage=4 -0.0 -0.3 +0.0 -0.9 N.D.
complex community Community=guar; Passage=4 -0.3 -0.0 +0.1 -0.9 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 -0.1 -0.1 -0.6 N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 -0.1 +0.1 -0.8 N.D.
complex community Community=arabino-guar; Passage=4 +0.5 -0.1 -0.6 -0.8 N.D.
complex community Community=arabino-guar; Passage=4 -0.1 +0.2 -0.1 -0.8 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.1 -0.0 -0.6 N.D.
vitamin M9 with Supernatant from Cyptococcus -0.3 -0.1 +0.1 -0.5 N.D.
complex community Community=guar; Passage=4 -0.0 -0.0 +0.5 -1.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.5 -0.1 -0.1 -0.1 N.D.
complex community Community=Locust bean gum; Passage=4 +0.2 +0.0 +0.1 -0.9 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 +0.0 +0.1 -0.5 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.4 +0.1 +0.1 -0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.0 +0.2 -0.4 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.1 +0.3 -0.4 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 +0.1 +0.1 -0.3 N.D.
complex community Community=Locust bean gum; Passage=4 -0.2 -0.0 +0.2 -0.2 N.D.
no phage control no phage control +0.1 -0.0 +0.1 -0.5 N.D.
vitamin M9 with Supernatant from Cyptococcus -0.3 -0.0 +0.2 -0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.4 -0.0 +0.1 -0.5 N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.2 +0.0 +0.2 -0.3 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.3 +0.1 +0.1 -0.4 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 -0.1 +0.4 -0.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 +0.1 +0.3 -0.1 N.D.
complex community Community=Kojac gum; Passage=4 +0.5 -0.2 +0.0 +0.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.3 +0.1 +0.2 +0.1 N.D.
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