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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF3724 and GFF3725 are separated by 219 nucleotides
GFF3725 and GFF3726 are separated by 312 nucleotides
GFF3726 and GFF3727 are separated by 13 nucleotides
GFF3727 and GFF3728 are separated by 3 nucleotides
GFF3724 - Glucans biosynthesis protein D precursor, at 3,766,619 to 3,768,100
GFF3724
GFF3725 - Flagellin protein FlaA, at 3,768,320 to 3,769,180
GFF3725
GFF3726 - Flagellar two-component response regulator FleR, at 3,769,493 to 3,770,770
GFF3726
GFF3727 - Flagellar hook-basal body complex protein FliE, at 3,770,784 to 3,771,143
GFF3727
GFF3728 - Flagellar M-ring protein FliF, at 3,771,147 to 3,772,895
GFF3728
Group
Condition
GFF3724
GFF3725
GFF3726
GFF3727
GFF3728
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.1
+0.1
+0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
+0.2
+0.1
+0.1
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
+0.2
+0.1
-0.0
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
+0.0
+0.2
+0.2
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
+0.4
+0.2
-0.2
+0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.0
-0.0
+0.4
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.2
+0.3
+0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
+0.1
+0.2
+0.3
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.0
+0.2
+0.4
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.1
+0.2
+0.2
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.2
+0.2
+0.0
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.2
+0.2
+0.2
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.1
+0.3
+0.4
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
+0.3
+0.3
+0.3
+0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
+0.1
+0.2
+0.4
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.2
+0.2
+0.3
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
+0.3
+0.2
+0.6
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
+0.3
+0.6
+0.6
+0.4
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