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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF3719 and GFF3720 are separated by 146 nucleotides
GFF3720 and GFF3721 are separated by 9 nucleotides
GFF3721 and GFF3722 are separated by 12 nucleotides
GFF3722 and GFF3723 are separated by 16 nucleotides
GFF3719 - hypothetical protein, at 3,760,487 to 3,760,798
GFF3719
GFF3720 - Flagellar protein FlgJ [peptidoglycan hydrolase], at 3,760,945 to 3,761,778
GFF3720
GFF3721 - Flagellar biosynthesis protein FlhA, at 3,761,788 to 3,763,905
GFF3721
GFF3722 - RNA polymerase sigma factor for flagellar operon, at 3,763,918 to 3,764,655
GFF3722
GFF3723 - Glucans biosynthesis glucosyltransferase H, at 3,764,672 to 3,766,534
GFF3723
Group
Condition
GFF3719
GFF3720
GFF3721
GFF3722
GFF3723
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
+0.1
+0.2
+0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.3
+0.2
+0.1
+0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.2
+0.2
+0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.2
+0.2
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
+0.2
+0.3
+0.2
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
+0.2
+0.2
+0.2
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.4
+0.1
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.2
+0.2
+0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.1
+0.2
+0.2
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.2
+0.2
+0.2
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
+0.3
+0.2
+0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.3
+0.2
+0.2
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
+0.4
+0.3
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.2
+0.2
+0.0
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.3
+0.2
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.3
+0.2
+0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
+0.5
+0.4
+0.3
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
+0.4
+0.3
+0.1
+0.4
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