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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF369 and GFF370 overlap by 4 nucleotides
GFF370 and GFF371 are separated by 53 nucleotides
GFF371 and GFF372 are separated by 374 nucleotides
GFF372 and GFF373 are separated by 138 nucleotides
GFF369 - Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13), at 361,417 to 362,454
GFF369
GFF370 - hypothetical protein, at 362,451 to 362,897
GFF370
GFF371 - N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18), at 362,951 to 364,093
GFF371
GFF372 - hypothetical protein, at 364,468 to 365,709
GFF372
GFF373 - hypothetical protein, at 365,848 to 366,495
GFF373
Group
Condition
GFF369
GFF370
GFF371
GFF372
GFF373
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.1
N.D.
-0.1
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.2
N.D.
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
-0.2
N.D.
+0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.2
N.D.
+0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
N.D.
+0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
+0.1
N.D.
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.2
N.D.
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.2
N.D.
-0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.0
N.D.
+0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.1
N.D.
+0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
-0.0
N.D.
+0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
-0.1
N.D.
+0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.2
N.D.
+0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.1
N.D.
+0.2
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
+0.2
N.D.
+0.1
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.4
N.D.
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
+0.3
N.D.
+0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.2
N.D.
+0.0
+0.3
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