Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3707 and GFF3708 are separated by 19 nucleotidesGFF3708 and GFF3709 are separated by 8 nucleotidesGFF3709 and GFF3710 are separated by 58 nucleotidesGFF3710 and GFF3711 are separated by 14 nucleotides GFF3707 - ABC transporter, permease protein 1 (cluster 11, riboflavin/purine nucleoside/unknown), at 206,686 to 207,807 GFF3707 GFF3708 - ABC transporter, ATP-binding protein (cluster 11, riboflavin/purine nucleoside/unknown) / ABC transporter, ATP-binding protein (cluster 11, riboflavin/purine nucleoside/unknown), at 207,827 to 209,353 GFF3708 GFF3709 - ABC transporter, substrate-binding protein (cluster 11, riboflavin/purine nucleoside/unknown), at 209,362 to 210,471 GFF3709 GFF3710 - Lactoylglutathione lyase and related lyases, at 210,530 to 210,916 GFF3710 GFF3711 - oxidoreductase, 2OG-Fe(II) oxygenase family, at 210,931 to 211,932 GFF3711
Group Condition GFF3707 GFF3708 GFF3709 GFF3710 GFF3711
vitamin M9 with Supernatant from Cyptococcus -0.3 -0.1 -0.1 -0.4 -0.7
complex community Community=arabino-guar; Passage=4 +0.2 +0.1 +0.5 -1.8 -0.3
complex community Community=Locust bean gum; Passage=1 -0.1 -0.5 -0.2 -0.2 -0.1
complex community Community=guar; Passage=4 -0.1 +0.2 -1.1 +0.3 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 -0.1 -0.5 +0.1 -0.6
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 -0.3 +0.2 -0.4 -0.3
complex community Community=guar; Passage=4 +0.0 -0.3 +0.1 -0.4 -0.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 -0.2 +0.2 -0.3 -0.7
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.2 -0.0 -0.3 -0.4
no phage control no phage control -0.0 +0.1 -0.2 -0.0 -0.7
complex community Community=Locust bean gum; Passage=4 +0.2 -0.2 +1.0 -1.4 -0.4
phage phage_bap4 +0.1 -0.0 -0.4 +0.3 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 -0.3 -0.0 -0.2 +0.2
phage phage_bap4 -0.1 -0.2 -0.1 +0.3 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL -0.0 -0.4 +0.1 -0.2 +0.2
phage phage_bap4 -0.1 +0.2 +0.1 +0.1 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 -0.3 +0.2 +0.1 -0.5
phage phage_bap4 +0.3 -0.1 -0.1 +0.2 -0.5
complex community Community=guar; Passage=4 +0.0 -0.8 +1.0 +0.5 -0.9
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.1 -0.3 -0.2 +0.4
complex community Community=arabino-guar; Passage=4 -0.2 +0.4 +0.1 -1.3 +0.9
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.2 -0.2 +0.4 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 -0.4 +0.1 +0.3 +0.3
complex community Community=guar; Passage=4 -0.4 +0.3 +0.0 -0.2 +0.6
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 -0.2 +0.5 -0.5 +0.6
complex community Community=arabino-guar; Passage=4 +0.6 +0.7 -0.2 +0.0 -0.4
complex community Community=Kojac gum; Passage=4 +0.1 -0.4 -0.0 +1.2 -0.2
complex community Community=Locust bean gum; Passage=4 +0.1 +0.7 +0.6 -0.3 -0.2
complex community Community=Locust bean gum; Passage=4 +0.8 -0.2 +0.5 -0.6 +0.5
complex community Community=Locust bean gum; Passage=4 +0.3 -0.4 +0.2 +1.1 +0.2
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