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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF3699 and GFF3700 are separated by 334 nucleotides
GFF3700 and GFF3701 are separated by 11 nucleotides
GFF3701 and GFF3702 are separated by 109 nucleotides
GFF3702 and GFF3703 are separated by 0 nucleotides
GFF3699 - putative surface-exposed virulence protein, at 78 to 5,765
GFF3699
GFF3700 - Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107), at 6,100 to 7,473
GFF3700
GFF3701 - Nitrite transporter NirC, at 7,485 to 8,294
GFF3701
GFF3702 - hypothetical protein, at 8,404 to 8,559
GFF3702
GFF3703 - Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4), at 8,560 to 8,886
GFF3703
Group
Condition
GFF3699
GFF3700
GFF3701
GFF3702
GFF3703
phage
LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
-0.1
-0.2
-0.3
-1.9
-0.6
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI
-0.0
+0.6
+0.1
-1.7
-0.6
phage
LB_plus_SM_buffer with P22_phage 15 MOI
-0.0
-0.7
+0.3
+0.2
-1.3
phage
LB_plus_SM_buffer with Br60_phage 0.0005 MOI
+0.1
-0.3
+0.0
-1.3
+0.1
phage
LB_plus_SM_buffer with 6D2_phage 0.75 MOI
+0.0
-0.3
-0.3
-0.4
-0.5
phage
6H2_phage 10 MOI; agar plate assay
+0.1
+0.6
+0.2
-1.4
-0.4
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
+0.2
-0.5
-0.2
+0.4
-0.7
phage
LB_plus_SM_buffer with 6C2_phage 0.25 MOI
+0.0
+0.6
-0.0
-0.7
-0.6
phage
LB_plus_SM_buffer with 6C2_phage 15 MOI
-0.1
+0.0
-0.3
+0.5
-0.6
phage
phi19h1_phage 15 MOI
+0.1
-0.5
+0.1
+0.3
-0.4
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI
+0.0
+0.5
+0.1
-0.5
-0.4
phage
LB_plus_SM_buffer with 6C2_phage 15 MOI
+0.0
-0.2
-0.1
+0.5
-0.4
phage
LB_plus_SM_buffer with S16_phage 15 MOI
-0.0
-0.1
-0.3
+0.6
-0.2
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
+0.1
-0.3
-0.0
+0.7
-0.5
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
+0.3
+0.3
+0.0
+0.1
-0.7
phage
LB_plus_SM_buffer with ES18h1_phage 0.75 MOI
+0.1
-0.7
-0.2
-0.1
+1.1
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
-0.0
-0.3
+0.0
+0.7
-0.1
phage
LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI
-0.1
-1.1
-0.0
+0.8
+0.9
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
+0.1
-0.3
+0.2
+0.7
-0.3
phage
LB_plus_SM_buffer with 6C2_phage 15 MOI
+0.1
+0.3
+0.0
+0.6
-0.4
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.0075 MOI
-0.0
+0.8
+0.2
-0.0
-0.2
phage
LB_plus_SM_buffer with phi19h1_phage 15 MOI
-0.1
-0.1
-0.1
+0.7
+0.2
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
+0.1
+0.0
+0.0
+1.0
-0.5
phage
LB_plus_SM_buffer with Ffm_phage 15 MOI
-0.0
-0.4
+0.1
+0.9
+0.3
phage
LB_plus_SM_buffer with S16_phage 15 MOI
-0.1
+0.5
-0.3
+1.1
-0.4
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
-0.0
+0.0
-0.0
+1.2
-0.2
phage
LB_plus_SM_buffer with Ffm_phage 0.1875 MOI
-0.0
+0.4
-0.1
+0.3
+0.5
phage
6F2_phage 15 MOI
+0.1
+0.4
+0.2
+0.2
+0.3
phage
LB_plus_SM_buffer with EIP30_phage 0.0000875 MOI
-0.1
-0.1
+0.2
+0.8
+0.6
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
+0.3
+0.6
+0.1
+0.9
+0.0
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