Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3698 and GFF3699 are separated by 22 nucleotidesGFF3699 and GFF3700 are separated by 59 nucleotidesGFF3700 and GFF3701 are separated by 126 nucleotidesGFF3701 and GFF3702 are separated by 5 nucleotides GFF3698 - ATP-dependent, 3'-5' DNA helicase with strand annealing activity, at 198,030 to 200,786 GFF3698 GFF3699 - Thioredoxin 2, at 200,809 to 201,258 GFF3699 GFF3700 - FIG006285: hypothetical protein, at 201,318 to 202,016 GFF3700 GFF3701 - FIG004694: Hypothetical protein, at 202,143 to 202,670 GFF3701 GFF3702 - Beta-propeller domains of methanol dehydrogenase type, at 202,676 to 203,533 GFF3702
Group Condition GFF3698 GFF3699 GFF3700 GFF3701 GFF3702
complex community Community=Locust bean gum; Passage=4 +0.2 N.D. N.D. -0.9 -3.4
complex community Community=arabino-guar; Passage=4 -0.5 N.D. N.D. +0.0 -3.6
complex community Community=Locust bean gum; Passage=4 +0.2 N.D. N.D. -0.2 -3.3
complex community Community=guar; Passage=4 +0.3 N.D. N.D. -0.0 -3.4
vitamin M9 with Supernatant from Cyptococcus +0.0 N.D. N.D. +0.1 -0.9
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 N.D. N.D. -0.3 -0.6
complex community Community=Kojac gum; Passage=4 +0.2 N.D. N.D. -0.5 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 N.D. N.D. +0.3 -0.6
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.3 N.D. N.D. +0.3 -0.2
complex community Community=guar; Passage=4 +0.0 N.D. N.D. -0.6 +0.7
complex community Community=Kojac gum; Passage=1 +0.2 N.D. N.D. +0.3 -0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 N.D. N.D. -0.2 +0.5
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 N.D. N.D. +0.0 +0.7
no phage control no phage control -0.0 N.D. N.D. +0.1 +0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 N.D. N.D. +0.1 +0.5
no phage control no phage control +0.1 N.D. N.D. +0.3 +0.4
phage phage_bap4 -0.1 N.D. N.D. +0.2 +0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 N.D. N.D. -0.1 +0.9
phage phage_bap4 -0.3 N.D. N.D. +0.3 +0.9
phage phage_bap4 +0.0 N.D. N.D. +0.1 +0.9
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 N.D. N.D. +0.3 +0.7
complex community Community=Locust bean gum; Passage=4 -0.1 N.D. N.D. +0.7 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 N.D. N.D. -0.3 +1.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.3 N.D. N.D. -0.1 +1.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 N.D. N.D. +0.1 +0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 N.D. N.D. +0.1 +0.8
complex community Community=guar; Passage=4 +0.0 N.D. N.D. -0.7 +2.2
complex community Community=Locust bean gum; Passage=4 +0.4 N.D. N.D. +0.7 +0.9
complex community Community=arabino-guar; Passage=4 +0.6 N.D. N.D. -0.3 +2.6
complex community Community=guar; Passage=4 +0.4 N.D. N.D. +0.3 +2.3
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