Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 552 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_18905	PS417_18910	PS417_18915	PS417_18920	PS417_18925
agar plate interaction control	Taped volatile agar plate with no fungus	-1.3	+0.2	-1.5	-1.0	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.8	-0.2	-1.0	+0.2	-0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.5	-0.1	-0.2	-0.9	-0.3
phage	JP1 MOI 1	-0.3	-0.2	-1.3	+0.3	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5	-0.5	-0.1	-0.9	+0.1
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.0	+0.2	-0.7	-0.0	+0.1
phage	P. simiae Grant Run MOI 0.1	-0.7	-0.5	-0.4	+0.5	-0.3
liquid stress	Fraxetin 2 mM; liquid stress	-0.2	-0.5	-0.9	+0.7	-0.4
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.4	+0.4	-0.6	-0.3	-0.3
root	root sample 6; outgrowth in LB	-1.0	-0.3	-0.1	+0.8	-0.2
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.8	+0.7	-0.4	-0.1	-0.2
phage	JP1 MOI 10	-0.1	+0.8	-1.2	-0.1	-0.2
phage	P. simiae OR Antrim MOI 1	-0.5	-0.6	-0.5	+0.9	-0.1
seeds	Growth on radish seeds for 72 hours	-0.1	+0.3	-1.0	-0.3	+0.5
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.8	-0.3	-0.7	-0.3	+0.0
carbon source	L-Valine (C)	+1.0	-0.4	+0.1	-1.2	+0.2
supernatant control	Vogels_fungal_media 0.1X	-0.4	-0.2	+0.9	-0.8	+0.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.7	-0.1	+0.5	-0.7	-0.4
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.9	+0.2	-0.0	-0.9	-0.1
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.7	+0.2	-0.3	+0.9	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.6	+0.1	-1.0	+0.4	+0.2
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	+0.7	+0.1	+0.4	-0.9	+0.1
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+0.5	+0.6	-0.8	+0.3	+0.2
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.8	+1.1	-0.1	+0.6	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	+0.9	+0.4	-0.6	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.3	-0.2	+1.5	+0.4	-0.4
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.9	-0.1	+0.7	+1.0	-0.6
soil	soil sample 7; outgrowth in LB	+1.0	+0.5	+0.3	-0.1	+0.3
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.7	-0.1	+0.5	+1.0	+0.1
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+1.2	+1.1	+0.8	+0.7	-0.2