Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3687 and GFF3688 are separated by 12 nucleotidesGFF3688 and GFF3689 are separated by 204 nucleotidesGFF3689 and GFF3690 overlap by 4 nucleotidesGFF3690 and GFF3691 overlap by 41 nucleotides GFF3687 - ATP synthase beta chain (EC 3.6.3.14), at 185,907 to 187,307 GFF3687 GFF3688 - ATP synthase epsilon chain (EC 3.6.3.14), at 187,320 to 187,739 GFF3688 GFF3689 - FIG01198523: hypothetical protein, at 187,944 to 189,146 GFF3689 GFF3690 - ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose), at 189,143 to 190,690 GFF3690 GFF3691 - ABC transporter, permease protein (cluster 2, ribose/xylose/arabinose/galactose), at 190,650 to 191,684 GFF3691
Group Condition GFF3687 GFF3688 GFF3689 GFF3690 GFF3691
complex community Community=arabino-guar; Passage=4 N.D. N.D. -1.4 -0.0 -0.1
complex community Community=guar; Passage=4 N.D. N.D. -0.0 -0.2 -0.5
complex community Community=guar; Passage=4 N.D. N.D. +0.1 -0.4 -0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. N.D. -0.2 -0.3 +0.1
phage phage_bap4 N.D. N.D. -0.2 -0.1 -0.0
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. -0.2 -0.2 -0.0
no phage control no phage control N.D. N.D. -0.3 -0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. +0.0 -0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. -0.3 -0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. N.D. -0.2 -0.3 +0.2
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. +0.2 -0.3 -0.2
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. -0.3 +0.0 +0.1
complex community Community=arabino-guar; Passage=4 N.D. N.D. +0.2 -0.2 -0.1
complex community Community=Locust bean gum; Passage=4 N.D. N.D. +0.6 -0.5 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. N.D. -0.2 +0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. +0.2 -0.2 -0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. N.D. +0.3 -0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. +0.1 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. +0.1 -0.1 +0.1
phage phage_bap4 N.D. N.D. -0.1 +0.2 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. +0.2 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. +0.2 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. +0.4 -0.3 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. +0.3 -0.1 +0.1
complex community Community=guar; Passage=4 N.D. N.D. +0.4 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. +0.4 -0.0 +0.0
complex community Community=Locust bean gum; Passage=1 N.D. N.D. +0.3 +0.2 +0.0
complex community Community=guar; Passage=4 N.D. N.D. +0.6 -0.1 +0.1
complex community Community=Locust bean gum; Passage=4 N.D. N.D. +0.5 -0.3 +0.3
complex community Community=Locust bean gum; Passage=4 N.D. N.D. +1.0 +0.3 -0.2
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