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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF3669 and GFF3670 are separated by 8 nucleotides
GFF3670 and GFF3671 overlap by 4 nucleotides
GFF3671 and GFF3672 are separated by 104 nucleotides
GFF3672 and GFF3673 are separated by 537 nucleotides
GFF3669 - D-arabinose-5-phosphate isomerase (EC 5.3.1.13), at 3,712,295 to 3,713,302
GFF3669
GFF3670 - 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38), at 3,713,311 to 3,714,111
GFF3670
GFF3671 - hypothetical protein, at 3,714,108 to 3,714,701
GFF3671
GFF3672 - FIG00985981: hypothetical protein, at 3,714,806 to 3,715,660
GFF3672
GFF3673 - Lipopolysaccharide export system protein LptA, at 3,716,198 to 3,716,755
GFF3673
Group
Condition
GFF3669
GFF3670
GFF3671
GFF3672
GFF3673
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-1.6
-1.9
-1.1
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.7
-1.1
-1.3
-0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.8
-1.0
-1.3
+0.2
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.6
-1.5
-0.7
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-1.3
-0.5
-0.9
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.5
-1.2
-0.6
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-1.5
-0.5
-0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.5
-0.7
-0.7
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.6
-0.3
-1.1
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.6
-0.3
-0.5
-0.2
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.6
-0.4
-0.4
+0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.3
-0.9
-0.4
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.5
-0.7
-0.1
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.7
-0.2
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
-0.6
-0.1
-0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
-0.4
-0.2
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.3
-0.3
+0.1
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.6
+0.4
+0.1
N.D.
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