Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF3669 and GFF3670 overlap by 4 nucleotidesGFF3670 and GFF3671 are separated by 27 nucleotidesGFF3671 and GFF3672 are separated by 299 nucleotidesGFF3672 and GFF3673 are separated by 140 nucleotides GFF3669 - Nitrate ABC transporter, ATP-binding protein, at 557,730 to 558,536 GFF3669 GFF3670 - Cyanate ABC transporter, permease protein, at 558,533 to 559,450 GFF3670 GFF3671 - Nitrate ABC transporter, nitrate-binding protein, at 559,478 to 560,791 GFF3671 GFF3672 - Response regulator NasT, at 561,091 to 562,389 GFF3672 GFF3673 - TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA, at 562,530 to 563,636 GFF3673
Group Condition GFF3669 GFF3670 GFF3671 GFF3672 GFF3673
carbon source Ying_all64 rep B; time point 3 N.D. -0.2 -0.2 +0.0 N.D.
carbon source Ying_all64 rep B; time point 1 N.D. -0.3 +0.0 +0.0 N.D.
carbon source Ying_sugar7 rep C; time point 2 N.D. -0.3 +0.1 -0.1 N.D.
carbon source Ying_all64 rep C; time point 2 N.D. -0.2 -0.1 +0.2 N.D.
carbon source Ying_all64 rep C; time point 3 N.D. -0.3 +0.0 +0.2 N.D.
carbon source Ying_OrganicAcid7 rep B; time point 3 N.D. -0.1 +0.2 -0.1 N.D.
carbon source Ying_Nucleobase14 rep B; time point 2 N.D. -0.1 +0.2 -0.1 N.D.
carbon source Ying_sugar7 rep A; time point 3 N.D. +0.1 -0.2 +0.1 N.D.
carbon source Ying_Others16 rep A; time point 2 N.D. -0.1 -0.1 +0.2 N.D.
carbon source Ying_OrganicAcid7 rep B; time point 2 N.D. -0.2 +0.1 +0.1 N.D.
carbon source Ying_Others16 rep B; time point 3 N.D. +0.1 +0.1 -0.2 N.D.
carbon source Ying_sugar7 rep C; time point 3 N.D. +0.2 -0.0 -0.2 N.D.
carbon source Ying_sugar7 rep B; time point 3 N.D. +0.2 -0.1 -0.0 N.D.
carbon source Ying_AminoAcid20 rep B; time point 3 N.D. +0.3 -0.0 -0.2 N.D.
carbon source Ying_OrganicAcid7 rep C; time point 2 N.D. +0.2 +0.1 -0.1 N.D.
carbon source Ying_Others16 rep C; time point 2 N.D. -0.1 +0.2 +0.1 N.D.
carbon source Ying_OrganicAcid7 rep A; time point 3 N.D. +0.3 +0.2 -0.2 N.D.
carbon source Ying_Nucleobase14 rep C; time point 1 N.D. +0.4 -0.1 -0.1 N.D.
carbon source Ying_OrganicAcid7 rep A; time point 2 N.D. +0.2 -0.0 +0.2 N.D.
carbon source Ying_AminoAcid20 rep C; time point 1 N.D. +0.1 +0.1 +0.2 N.D.
carbon source Ying_AminoAcid20 rep B; time point 2 N.D. +0.0 +0.1 +0.2 N.D.
carbon source Ying_AminoAcid20 rep C; time point 3 N.D. +0.3 +0.1 -0.0 N.D.
carbon source Ying_Others16 rep B; time point 2 N.D. +0.1 +0.1 +0.1 N.D.
carbon source Ying_sugar7 rep A; time point 1 N.D. +0.2 +0.1 +0.1 N.D.
carbon source Ying_sugar7 rep B; time point 1 N.D. +0.1 +0.1 +0.2 N.D.
carbon source Ying_all64 rep A; time point 2 N.D. +0.1 +0.2 +0.2 N.D.
carbon source Ying_all64 rep C; time point 1 N.D. +0.3 +0.2 +0.2 N.D.
carbon source Ying_all64 rep B; time point 2 N.D. +0.4 +0.3 +0.1 N.D.
carbon source Ying_sugar7 rep C; time point 1 N.D. +0.8 -0.0 +0.0 N.D.
carbon source Ying_Nucleobase14 rep A; time point 1 N.D. +0.6 +0.2 +0.1 N.D.
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