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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF3656 and GFF3657 are separated by 63 nucleotides
GFF3657 and GFF3658 are separated by 355 nucleotides
GFF3658 and GFF3659 overlap by 41 nucleotides
GFF3659 and GFF3660 are separated by 123 nucleotides
GFF3656 - hypothetical protein, at 3,698,383 to 3,698,775
GFF3656
GFF3657 - hypothetical protein, at 3,698,839 to 3,700,272
GFF3657
GFF3658 - Tetrapartite efflux system, inner membrane component FusBC-like, at 3,700,628 to 3,702,679
GFF3658
GFF3659 - putative phospholipase D family protein, at 3,702,639 to 3,703,832
GFF3659
GFF3660 - DNA-directed RNA polymerase omega subunit (EC 2.7.7.6), at 3,703,956 to 3,704,300
GFF3660
Group
Condition
GFF3656
GFF3657
GFF3658
GFF3659
GFF3660
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.6
+0.0
-0.3
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
-0.3
-0.1
+0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.0
+0.0
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
-0.1
-0.1
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.1
-0.0
+0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.0
-0.0
-0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
-0.1
+0.0
-0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
-0.1
-0.1
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
-0.1
+0.0
+0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.1
+0.0
-0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
-0.1
+0.0
+0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
+0.1
+0.1
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.1
-0.0
-0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.3
-0.1
-0.0
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
-0.0
-0.1
-0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
-0.0
-0.0
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.1
-0.1
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.0
+0.0
-0.0
N.D.
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