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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Hydrogenophaga sp. GW460-11-11-14-LB1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF3653 and GFF3654 overlap by 4 nucleotides
GFF3654 and GFF3655 are separated by 72 nucleotides
GFF3655 and GFF3656 are separated by 96 nucleotides
GFF3656 and GFF3657 are separated by 109 nucleotides
GFF3653 - Molybdopterin biosynthesis molybdochelatase MogA, at 539,534 to 540,142
GFF3653
GFF3654 - FIG138315: Putative alpha helix protein, at 540,139 to 540,786
GFF3654
GFF3655 - TldE protein, part of TldE/TldD proteolytic complex, at 540,859 to 542,274
GFF3655
GFF3656 - Transamidase GatB domain protein, at 542,371 to 542,820
GFF3656
GFF3657 - SSU ribosomal protein S21p, at 542,930 to 543,142
GFF3657
Group
Condition
GFF3653
GFF3654
GFF3655
GFF3656
GFF3657
carbon source
Ying_AminoAcid20 rep A; time point 3
-1.8
-1.5
-0.5
+0.1
N.D.
carbon source
Ying_Others16 rep C; time point 3
-0.3
-0.8
-2.1
+0.0
N.D.
carbon source
Ying_sugar7 rep B; time point 3
-0.2
-1.1
-1.8
-0.1
N.D.
carbon source
Ying_all64 rep A; time point 3
-0.9
-0.6
-1.2
-0.2
N.D.
carbon source
Ying_OrganicAcid7 rep B; time point 3
-0.7
-0.8
-1.6
+0.2
N.D.
carbon source
Ying_OrganicAcid7 rep C; time point 3
-0.8
-0.7
-1.4
+0.0
N.D.
carbon source
Ying_all64 rep C; time point 3
-0.9
-0.9
-0.4
-0.2
N.D.
carbon source
Ying_sugar7 rep C; time point 3
-0.7
-0.9
-0.6
-0.1
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 3
-1.0
-0.5
-0.7
-0.0
N.D.
carbon source
Ying_OrganicAcid7 rep A; time point 2
-0.6
-0.7
-0.9
-0.0
N.D.
carbon source
Ying_sugar7 rep A; time point 2
-1.3
-0.3
-0.6
-0.0
N.D.
carbon source
Ying_Others16 rep A; time point 3
-0.6
-1.3
-0.3
+0.2
N.D.
carbon source
Ying_AminoAcid20 rep B; time point 3
-0.9
-0.7
-0.6
+0.1
N.D.
carbon source
Ying_all64 rep B; time point 3
-0.2
-0.6
-1.1
-0.2
N.D.
carbon source
Ying_AminoAcid20 rep B; time point 2
-0.9
-0.4
-0.6
-0.1
N.D.
carbon source
Ying_sugar7 rep C; time point 2
-0.9
-0.3
-0.6
+0.0
N.D.
carbon source
Ying_OrganicAcid7 rep A; time point 3
-0.3
-0.4
-1.3
+0.2
N.D.
carbon source
Ying_OrganicAcid7 rep C; time point 2
-0.5
-0.3
-0.8
-0.1
N.D.
carbon source
Ying_sugar7 rep B; time point 2
-0.8
-0.1
-0.6
-0.1
N.D.
carbon source
Ying_Others16 rep B; time point 3
-0.4
-0.5
-0.8
+0.0
N.D.
carbon source
Ying_Others16 rep A; time point 2
-0.4
+0.1
-1.2
-0.1
N.D.
carbon source
Ying_sugar7 rep A; time point 3
-0.3
-0.7
-0.5
+0.2
N.D.
carbon source
Ying_Others16 rep B; time point 2
-0.4
+0.7
-1.2
-0.1
N.D.
carbon source
Ying_all64 rep A; time point 2
-0.5
+0.3
-0.8
+0.1
N.D.
carbon source
Ying_Nucleobase14 rep B; time point 1
-0.9
+0.8
-0.2
-0.2
N.D.
carbon source
Ying_Others16 rep A; time point 1
-0.4
+0.6
-0.6
-0.1
N.D.
carbon source
Ying_Nucleobase14 rep B; time point 2
-1.0
+1.1
-0.2
-0.2
N.D.
carbon source
Ying_Nucleobase14 rep A; time point 1
-1.0
+1.0
-0.2
+0.0
N.D.
carbon source
Ying_Nucleobase14 rep A; time point 2
-0.6
+1.2
-0.4
+0.0
N.D.
carbon source
Ying_Nucleobase14 rep C; time point 2
-0.7
+1.3
-0.3
+0.1
N.D.
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