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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF3649 and GFF3650 are separated by 175 nucleotides
GFF3650 and GFF3651 are separated by 360 nucleotides
GFF3651 and GFF3652 are separated by 102 nucleotides
GFF3652 and GFF3653 overlap by 8 nucleotides
GFF3649 - Transcriptional regulator, AsnC family, at 3,692,556 to 3,693,023
GFF3649
GFF3650 - Alanine dehydrogenase (EC 1.4.1.1), at 3,693,199 to 3,694,314
GFF3650
GFF3651 - Uncharacterized UPF0721 integral membrane protein, at 3,694,675 to 3,695,505
GFF3651
GFF3652 - Two-component transcriptional response regulator, OmpR family, at 3,695,608 to 3,696,306
GFF3652
GFF3653 - hypothetical protein, at 3,696,299 to 3,697,651
GFF3653
Group
Condition
GFF3649
GFF3650
GFF3651
GFF3652
GFF3653
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
-0.1
-0.3
-0.2
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.3
+0.0
-0.1
+0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
+0.3
+0.2
-0.5
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.0
-0.1
-0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
+0.1
-0.1
+0.0
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.0
+0.1
-0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.1
-0.1
-0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
+0.0
+0.0
+0.2
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.0
+0.1
-0.3
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.1
+0.1
-0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.2
-0.2
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.0
-0.0
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.1
-0.0
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.1
-0.1
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.1
-0.0
-0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.2
-0.2
-0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.0
+0.1
+0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.3
-0.0
+0.0
+0.1
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