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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF3610 and GFF3611 are separated by 0 nucleotides
GFF3611 and GFF3612 overlap by 4 nucleotides
GFF3612 and GFF3649 are separated by 157 nucleotides
GFF3649 and GFF3650 are separated by 10 nucleotides
GFF3610 - Type III secretion inner membrane protein (YscS,homologous to flagellar export components), at 361,594 to 361,707
GFF3610
GFF3611 - Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components), at 361,708 to 362,487
GFF3611
GFF3612 - Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components), at 362,484 to 363,542
GFF3612
GFF3649 - tRNA-Val-GAC, at 363,700 to 363,776
GFF3649
GFF3650 - tRNA-Val-GAC, at 363,787 to 363,863
GFF3650
Group
Condition
GFF3610
GFF3611
GFF3612
GFF3649
GFF3650
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
N.D.
N.D.
-1.0
N.D.
N.D.
phage
LB_plus_SM_buffer with 6F2_phage 1.875 MOI
N.D.
N.D.
-0.5
N.D.
N.D.
phage
LB_plus_SM_buffer with Ffm_phage 0.001875 MOI
N.D.
N.D.
-0.5
N.D.
N.D.
phage
LB_plus_SM_buffer with EIP16_phage 8.75 MOI
N.D.
N.D.
-0.5
N.D.
N.D.
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
N.D.
N.D.
-0.4
N.D.
N.D.
phage
phi19h1_phage 15 MOI
N.D.
N.D.
-0.4
N.D.
N.D.
phage
LB_plus_SM_buffer with ES18h1_phage 0.75 MOI
N.D.
N.D.
-0.3
N.D.
N.D.
phage
LB_plus_SM_buffer with 6F2_phage 0.01875 MOI
N.D.
N.D.
-0.3
N.D.
N.D.
phage
phi19h1_phage 15 MOI
N.D.
N.D.
-0.3
N.D.
N.D.
micoeukaryotes
C.elegans, mixed culture-1
N.D.
N.D.
-0.3
N.D.
N.D.
phage
LB_plus_SM_buffer with EIP16_phage 0.875 MOI
N.D.
N.D.
-0.3
N.D.
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
N.D.
N.D.
-0.2
N.D.
N.D.
phage
Br60_phage 15 MOI
N.D.
N.D.
-0.2
N.D.
N.D.
phage
LB_plus_SM_buffer with Ffm_phage 1.875 MOI
N.D.
N.D.
-0.2
N.D.
N.D.
phage
LB_plus_SM_buffer with EIP16_phage 0.0875 MOI
N.D.
N.D.
-0.2
N.D.
N.D.
phage
LB_plus_SM_buffer with S16_phage 15 MOI
N.D.
N.D.
+0.2
N.D.
N.D.
phage
LB_plus_SM_buffer with 6F2_phage 0.1875 MOI
N.D.
N.D.
+0.2
N.D.
N.D.
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
N.D.
N.D.
+0.2
N.D.
N.D.
phage
LB_plus_SM_buffer with EIP30_phage 0.0000875 MOI
N.D.
N.D.
+0.3
N.D.
N.D.
phage
LB_plus_SM_buffer with 6C2_phage 15 MOI
N.D.
N.D.
+0.3
N.D.
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
N.D.
N.D.
+0.3
N.D.
N.D.
micoeukaryotes
Dictyostellum sp.mixed culture-2
N.D.
N.D.
+0.3
N.D.
N.D.
micoeukaryotes
C.elegans, mixed culture-2
N.D.
N.D.
+0.3
N.D.
N.D.
phage
LB_plus_SM_buffer with P22_phage 15 MOI
N.D.
N.D.
+0.3
N.D.
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
N.D.
N.D.
+0.4
N.D.
N.D.
nophagecontrol
No phage control
N.D.
N.D.
+0.4
N.D.
N.D.
phage
LB_plus_SM_buffer with Br60_phage 0.000005 MOI
N.D.
N.D.
+0.5
N.D.
N.D.
phage
LB_plus_SM_buffer with 6C2_phage 15 MOI
N.D.
N.D.
+0.5
N.D.
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
N.D.
N.D.
+0.6
N.D.
N.D.
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
N.D.
N.D.
+0.6
N.D.
N.D.
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