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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF3602 and GFF3603 are separated by 193 nucleotides
GFF3603 and GFF3604 are separated by 14 nucleotides
GFF3604 and GFF3605 are separated by 48 nucleotides
GFF3605 and GFF3606 are separated by 133 nucleotides
GFF3602 - Potassium efflux system KefA protein / Small-conductance mechanosensitive channel, at 3,647,026 to 3,648,102
GFF3602
GFF3603 - DNA methylase, putative, at 3,648,296 to 3,648,628
GFF3603
GFF3604 - ATP-dependent DNA helicase RecG (EC 3.6.4.12), at 3,648,643 to 3,650,745
GFF3604
GFF3605 - Succinate dehydrogenase flavin-adding protein, antitoxin of CptAB toxin-antitoxin, at 3,650,794 to 3,651,060
GFF3605
GFF3606 - Transcription-repair coupling factor, at 3,651,194 to 3,654,670
GFF3606
Group
Condition
GFF3602
GFF3603
GFF3604
GFF3605
GFF3606
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
-1.3
-0.5
N.D.
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
-0.2
-1.1
N.D.
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.5
-0.8
N.D.
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
-0.5
-0.4
N.D.
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.1
-0.8
N.D.
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
-0.2
-0.5
N.D.
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
+0.1
-0.4
N.D.
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
-0.2
-0.2
N.D.
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
-0.0
-0.5
N.D.
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.0
-0.2
N.D.
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.0
-0.2
N.D.
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
-0.2
N.D.
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
+0.5
-0.5
N.D.
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.2
+0.0
N.D.
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
-0.2
-0.1
N.D.
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
+0.2
-0.2
N.D.
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.4
-0.3
N.D.
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.2
+0.1
N.D.
+0.1
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