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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF3587 and GFF3588 are separated by 465 nucleotides
GFF3588 and GFF3589 are separated by 9 nucleotides
GFF3589 and GFF3590 are separated by 16 nucleotides
GFF3590 and GFF3591 are separated by 19 nucleotides
GFF3587 - hypothetical protein, at 3,631,587 to 3,631,991
GFF3587
GFF3588 - hypothetical protein, at 3,632,457 to 3,632,795
GFF3588
GFF3589 - hypothetical protein, at 3,632,805 to 3,633,074
GFF3589
GFF3590 - DNA internalization-related competence protein ComEC/Rec2, at 3,633,091 to 3,634,074
GFF3590
GFF3591 - Glutamyl-tRNA synthetase (EC 6.1.1.17), at 3,634,094 to 3,635,566
GFF3591
Group
Condition
GFF3587
GFF3588
GFF3589
GFF3590
GFF3591
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
+0.0
-0.2
-0.2
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.3
+0.0
+0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.1
-0.2
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.2
-0.3
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.0
-0.1
+0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.1
-0.2
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.0
-0.0
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.0
-0.0
+0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.0
+0.1
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.0
+0.1
+0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.0
+0.1
-0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
+0.0
-0.0
-0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
+0.3
+0.2
+0.2
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
+0.3
+0.2
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.4
+0.0
-0.2
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
+0.3
+0.0
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.2
+0.2
-0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.1
+0.2
+0.2
N.D.
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