Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3584 and GFF3585 overlap by 23 nucleotidesGFF3585 and GFF3586 are separated by 23 nucleotidesGFF3586 and GFF3587 are separated by 22 nucleotidesGFF3587 and GFF3588 are separated by 10 nucleotides GFF3584 - hypothetical protein, at 95,813 to 96,334 GFF3584 GFF3585 - Sulfate transport system permease protein CysT, at 96,312 to 97,133 GFF3585 GFF3586 - ABC-type Fe3+ transport system, periplasmic component, at 97,157 to 98,236 GFF3586 GFF3587 - KEGG: putative spermidine/putrescine transport system ATP-binding protein, at 98,259 to 99,287 GFF3587 GFF3588 - ABC transporter, permease protein 2 (cluster 1, maltose/g3p/polyamine/iron), at 99,298 to 100,164 GFF3588
Group Condition GFF3584 GFF3585 GFF3586 GFF3587 GFF3588
complex community Community=arabino-guar; Passage=4 -2.4 -0.4 -0.4 +0.1 -0.5
complex community Community=arabino-guar; Passage=4 -2.5 -0.2 -0.4 +0.2 -0.3
complex community Community=Locust bean gum; Passage=4 -2.3 -0.1 +0.1 -0.5 -0.2
complex community Community=Kojac gum; Passage=4 -2.3 -0.2 +0.2 -0.2 -0.4
complex community Community=Locust bean gum; Passage=4 -2.4 -0.0 +0.1 -0.1 +0.0
complex community Community=arabino-guar; Passage=4 -1.5 -0.2 -0.4 -0.1 -0.1
complex community Community=Locust bean gum; Passage=4 -2.3 -0.1 +0.1 -0.0 +0.1
complex community Community=arabino-guar; Passage=4 -2.4 +0.2 -0.0 +0.0 +0.0
complex community Community=guar; Passage=4 +0.1 -0.3 -0.0 -0.7 -0.6
no phage control no phage control -1.4 -0.1 +0.0 +0.1 -0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -1.1 +0.0 -0.1 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.8 -0.0 -0.2 -0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -1.4 +0.1 +0.2 -0.0 +0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -1.1 -0.2 +0.1 +0.0 +0.1
complex community Community=guar; Passage=4 -0.1 -0.3 -0.1 -0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -1.4 +0.5 +0.0 -0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.7 -0.1 -0.0 +0.1 +0.0
no phage control no phage control -0.8 -0.0 +0.1 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -1.0 +0.2 +0.2 +0.0 +0.1
phage phage_bap4 -0.5 +0.1 -0.2 +0.1 -0.1
phage phage_bap4 -0.7 +0.0 -0.0 +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.6 +0.1 +0.1 +0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 +0.2 +0.1 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.8 -0.1 -0.2 -0.2 +0.0
complex community Community=guar; Passage=4 +1.2 -0.1 -0.1 -0.3 -0.3
complex community Community=guar; Passage=4 +0.8 +0.0 -0.1 +0.1 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.4 +0.0 -0.1 +0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.7 -0.1 +0.1 -0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.8 +0.2 +0.1 -0.0 +0.1
complex community Community=Locust bean gum; Passage=4 +1.5 +0.0 -0.1 +0.3 +0.1
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