Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF355 and GFF356 are separated by 34 nucleotidesGFF356 and GFF357 are separated by 73 nucleotidesGFF357 and GFF358 are separated by 137 nucleotidesGFF358 and GFF359 are separated by 91 nucleotides GFF355 - Adenylate kinase (EC 2.7.4.3), at 386,162 to 386,818 GFF355 GFF356 - L-asparaginase (EC 3.5.1.1), at 386,853 to 387,815 GFF356 GFF357 - SOS-response repressor and protease LexA (EC 3.4.21.88), at 387,889 to 388,572 GFF357 GFF358 - hypothetical protein, at 388,710 to 389,075 GFF358 GFF359 - D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95), at 389,167 to 390,174 GFF359
Group Condition GFF355 GFF356 GFF357 GFF358 GFF359
complex community Community=guar; Passage=4 N.D. -0.0 -0.7 -1.6 -0.1
complex community Community=Kojac gum; Passage=4 N.D. -0.0 -0.9 -0.4 +0.1
complex community Community=arabino-guar; Passage=4 N.D. +0.4 -1.1 -0.9 +0.5
phage phage_bap4 N.D. +0.0 -0.2 -0.6 +0.0
no phage control no phage control N.D. +0.1 -0.5 -0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus N.D. -0.0 -0.8 +0.2 -0.1
vitamin M9 with Supernatant from Cyptococcus N.D. -0.0 -0.4 -0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. +0.1 -0.3 -0.2 -0.2
phage phage_bap4 N.D. -0.2 -0.5 -0.3 +0.5
complex community Community=guar; Passage=4 N.D. +0.1 -0.8 +0.1 +0.1
complex community Community=guar; Passage=4 N.D. -0.1 -0.6 +0.3 -0.1
complex community Community=Locust bean gum; Passage=4 N.D. -0.1 -0.6 -0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.1 +0.1 -0.3 -0.2
complex community Community=arabino-guar; Passage=4 N.D. +0.1 -0.9 +0.4 -0.1
phage phage_bap4 N.D. -0.2 -0.3 +0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.0 +0.2 -0.2 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.1 +0.2 -0.2 -0.2
phage phage_bap4 N.D. +0.1 -0.3 -0.3 +0.2
phage phage_bap4 N.D. +0.1 -0.5 -0.0 +0.3
vitamin M9 with Supernatant from Cyptococcus N.D. -0.2 -0.5 +0.5 +0.1
complex community Community=Locust bean gum; Passage=4 N.D. +0.0 -0.6 +0.3 +0.3
phage phage_bap4 N.D. +0.0 -0.4 -0.0 +0.4
phage phage_bap4 N.D. +0.1 -0.5 +0.1 +0.3
complex community Community=arabino-guar; Passage=4 N.D. +0.5 -0.8 +0.0 +0.3
complex community Community=Locust bean gum; Passage=4 N.D. +0.2 -0.7 +0.3 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.0 -0.2 +0.4 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. +0.2 -0.0 +0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.1 +0.1 +0.3 -0.2
complex community Community=Locust bean gum; Passage=4 N.D. -0.4 -0.1 +0.4 +0.5
complex community Community=arabino-guar; Passage=4 N.D. +0.0 -0.7 +0.5 +0.6
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