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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF355 and GFF356 are separated by 364 nucleotides
GFF356 and GFF357 are separated by 131 nucleotides
GFF357 and GFF358 are separated by 83 nucleotides
GFF358 and GFF359 are separated by 12 nucleotides
GFF355 - Transcriptional regulator Swit_0960, LysR family, at 346,908 to 347,798
GFF355
GFF356 - Sulfur carrier protein ThiS / Thiazole synthase (EC 2.8.1.10), at 348,163 to 349,164
GFF356
GFF357 - 3-dehydroquinate dehydratase II (EC 4.2.1.10), at 349,296 to 349,736
GFF357
GFF358 - Biotin carboxyl carrier protein of acetyl-CoA carboxylase, at 349,820 to 350,308
GFF358
GFF359 - Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14), at 350,321 to 351,673
GFF359
Group
Condition
GFF355
GFF356
GFF357
GFF358
GFF359
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.4
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.3
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
-0.3
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
-0.3
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
-0.4
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
-0.4
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.2
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
-0.3
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.2
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.2
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.1
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
-0.2
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.0
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.1
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.1
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.1
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.2
N.D.
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.1
N.D.
N.D.
N.D.
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