Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF3561 and GFF3562 are separated by 64 nucleotidesGFF3562 and GFF3563 overlap by 23 nucleotidesGFF3563 and GFF3564 are separated by 103 nucleotidesGFF3564 and GFF3565 are separated by 31 nucleotides GFF3561 - Glutamate--cysteine ligase (EC 6.3.2.2), at 452,336 to 453,895 GFF3561 GFF3562 - Dienelactone hydrolase family, at 453,960 to 454,886 GFF3562 GFF3563 - NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2, at 454,864 to 455,499 GFF3563 GFF3564 - Transcriptional regulator, TetR family, at 455,603 to 456,184 GFF3564 GFF3565 - hypothetical protein, at 456,216 to 456,686 GFF3565
Group Condition GFF3561 GFF3562 GFF3563 GFF3564 GFF3565
carbon source Ying_Others16 rep A; time point 3 -1.9 +0.1 -0.0 +0.0 -0.0
carbon source Ying_sugar7 rep A; time point 2 -0.6 -0.1 -0.5 -0.1 -0.2
carbon source Ying_all64 rep C; time point 3 -2.2 +0.3 +0.6 +0.1 -0.4
carbon source Ying_sugar7 rep B; time point 2 -0.6 -0.0 -0.8 +0.1 -0.3
carbon source Ying_OrganicAcid7 rep C; time point 2 -0.4 -0.0 -0.6 -0.1 -0.3
carbon source Ying_sugar7 rep A; time point 1 -0.4 -0.1 -0.5 -0.0 -0.3
carbon source Ying_sugar7 rep A; time point 3 -0.8 +0.0 -0.2 -0.1 -0.2
carbon source Ying_Others16 rep A; time point 2 -0.6 -0.2 +0.1 -0.4 -0.1
carbon source Ying_Others16 rep C; time point 3 -0.7 -0.1 +0.0 -0.1 -0.3
carbon source Ying_sugar7 rep C; time point 3 -0.9 -0.1 +0.2 +0.1 -0.3
carbon source Ying_Others16 rep B; time point 2 -0.7 +0.0 -0.2 -0.2 +0.0
carbon source Ying_AminoAcid20 rep C; time point 3 -0.4 +0.0 +0.1 -0.4 -0.3
carbon source Ying_OrganicAcid7 rep C; time point 1 -0.3 -0.1 -0.2 -0.3 -0.2
carbon source Ying_sugar7 rep C; time point 1 -0.6 +0.1 -0.4 -0.1 +0.0
carbon source Ying_sugar7 rep B; time point 3 -0.7 -0.0 +0.1 -0.2 -0.2
carbon source Ying_sugar7 rep C; time point 2 -0.8 -0.1 -0.1 +0.1 -0.0
carbon source Ying_Others16 rep B; time point 1 -0.5 +0.0 -0.5 +0.0 +0.0
carbon source Ying_AminoAcid20 rep C; time point 2 -0.1 -0.0 -0.4 -0.3 -0.1
carbon source Ying_Others16 rep A; time point 1 -0.4 +0.0 -0.4 -0.1 +0.0
carbon source Ying_all64 rep C; time point 2 -1.4 +0.2 +0.2 +0.4 -0.1
carbon source Ying_OrganicAcid7 rep B; time point 3 -0.5 +0.0 +0.2 -0.1 -0.4
carbon source Ying_OrganicAcid7 rep C; time point 3 -0.5 +0.1 +0.1 -0.2 -0.1
carbon source Ying_Others16 rep B; time point 3 -0.8 -0.0 +0.4 +0.2 -0.2
carbon source Ying_Nucleobase14 rep C; time point 2 +0.4 +0.0 -0.2 -0.4 -0.3
carbon source Ying_AminoAcid20 rep B; time point 3 -0.3 -0.0 +0.3 -0.1 -0.2
carbon source Ying_all64 rep A; time point 3 -0.4 -0.0 +0.2 +0.2 -0.3
carbon source Ying_Nucleobase14 rep B; time point 2 +0.6 -0.0 +0.1 -0.3 -0.4
carbon source Ying_all64 rep B; time point 3 -0.2 +0.2 +0.2 -0.1 -0.3
carbon source Ying_Nucleobase14 rep B; time point 1 +0.5 -0.0 -0.2 +0.0 -0.3
carbon source Ying_Nucleobase14 rep A; time point 2 +0.5 -0.0 -0.2 -0.3 -0.0
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