Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3560 and GFF3561 are separated by 36 nucleotidesGFF3561 and GFF3562 are separated by 96 nucleotidesGFF3562 and GFF3563 are separated by 17 nucleotidesGFF3563 and GFF3564 are separated by 58 nucleotides GFF3560 - hypothetical protein, at 71,021 to 72,040 GFF3560 GFF3561 - Glycosyltransferases involved in cell wall biogenesis, at 72,077 to 73,105 GFF3561 GFF3562 - UDP-glucose 6-dehydrogenase (EC 1.1.1.22), at 73,202 to 74,542 GFF3562 GFF3563 - L-carnitine dehydratase/bile acid-inducible protein F, at 74,560 to 75,684 GFF3563 GFF3564 - BUG/TctC family periplasmic protein, at 75,743 to 76,720 GFF3564
Group Condition GFF3560 GFF3561 GFF3562 GFF3563 GFF3564
complex community Community=Locust bean gum; Passage=4 -0.1 -0.6 -1.5 -0.2 +0.2
complex community Community=guar; Passage=4 +0.2 -0.1 -2.0 -0.4 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 -0.2 -0.2 -0.3 -0.1
phage phage_bap4 -0.3 -0.1 +0.2 -0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.0 -0.4 -0.1 +0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.1 -0.2 +0.2 -0.2 -0.1
complex community Community=arabino-guar; Passage=4 +0.2 -0.0 -0.7 +0.0 +0.1
complex community Community=arabino-guar; Passage=4 +0.0 +0.0 -0.8 -0.1 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 -0.1 -0.3 -0.1 +0.0
phage phage_bap4 -0.2 +0.1 +0.1 +0.1 -0.1
complex community Community=Locust bean gum; Passage=4 +0.5 +0.4 -0.5 -0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.0 -0.2 -0.1 +0.1
complex community Community=arabino-guar; Passage=4 -0.0 +0.1 -0.8 +0.6 +0.1
complex community Community=guar; Passage=4 +0.2 -0.2 +0.7 -0.5 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 +0.1 -0.2 +0.1 +0.1
complex community Community=guar; Passage=4 -0.1 +0.1 -0.1 +0.3 -0.2
complex community Community=arabino-guar; Passage=4 +0.4 +0.1 -0.5 -0.0 +0.2
phage phage_bap4 -0.0 +0.0 +0.3 -0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 +0.1 +0.2 -0.3 +0.1
complex community Community=Kojac gum; Passage=4 -0.2 -0.2 +0.8 -0.0 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.2 -0.1 +0.1 +0.2
phage phage_bap4 -0.0 -0.1 +0.3 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.1 -0.2 +0.2 -0.0
complex community Community=Kojac gum; Passage=1 -0.0 +0.0 +0.4 +0.0 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.3 -0.1 +0.1 +0.1
complex community Community=Locust bean gum; Passage=4 +0.4 +0.2 +0.0 -0.2 +0.1
complex community Community=Locust bean gum; Passage=4 +0.1 +0.3 -0.4 +0.4 +0.1
phage phage_bap4 -0.0 +0.2 +0.2 +0.3 -0.0
no phage control no phage control +0.0 +0.1 +0.4 +0.2 +0.1
complex community Community=guar; Passage=4 +0.4 +0.2 +0.8 -0.2 +0.1
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