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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF3556 and GFF3557 are separated by 69 nucleotides
GFF3557 and GFF3558 overlap by 1 nucleotides
GFF3558 and GFF3559 are separated by 62 nucleotides
GFF3559 and GFF3560 are separated by 113 nucleotides
GFF3556 - Gene Transfer Agent terminase protein, at 3,600,629 to 3,601,858
GFF3556
GFF3557 - hypothetical protein, at 3,601,928 to 3,603,358
GFF3557
GFF3558 - Putative head protein (ACLAME 50), at 3,603,358 to 3,604,428
GFF3558
GFF3559 - hypothetical protein, at 3,604,491 to 3,605,168
GFF3559
GFF3560 - hypothetical protein, at 3,605,282 to 3,606,277
GFF3560
Group
Condition
GFF3556
GFF3557
GFF3558
GFF3559
GFF3560
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
-0.4
+0.0
-0.8
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.4
-0.5
-0.1
-0.3
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.4
-0.3
-0.0
-0.5
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.4
-0.5
-0.0
-0.3
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
-0.6
+0.1
-0.8
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.3
+0.0
-0.4
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.3
-0.3
+0.0
-0.2
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.4
+0.0
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
-0.6
+0.1
-0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
-0.3
-0.0
-0.3
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.4
-0.2
-0.0
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
-0.4
+0.1
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.2
+0.0
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.6
+0.3
+0.2
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.2
-0.0
+0.3
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.0
+0.1
-0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.2
+0.2
+0.2
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-0.1
+0.3
+0.0
+0.3
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