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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF353 and GFF354 overlap by 1 nucleotides
GFF354 and GFF355 are separated by 88 nucleotides
GFF355 and GFF356 are separated by 364 nucleotides
GFF356 and GFF357 are separated by 131 nucleotides
GFF353 - Acid phosphatase (EC 3.1.3.2), at 345,225 to 346,109
GFF353
GFF354 - Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5), at 346,109 to 346,819
GFF354
GFF355 - Transcriptional regulator Swit_0960, LysR family, at 346,908 to 347,798
GFF355
GFF356 - Sulfur carrier protein ThiS / Thiazole synthase (EC 2.8.1.10), at 348,163 to 349,164
GFF356
GFF357 - 3-dehydroquinate dehydratase II (EC 4.2.1.10), at 349,296 to 349,736
GFF357
Group
Condition
GFF353
GFF354
GFF355
GFF356
GFF357
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.0
-0.0
-0.4
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
-0.1
+0.0
-0.3
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.3
+0.2
-0.3
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.0
-0.0
-0.3
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.1
+0.3
-0.4
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
+0.0
+0.1
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.0
+0.1
-0.2
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
+0.1
+0.1
-0.2
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.1
+0.0
-0.3
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.2
+0.0
-0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.1
+0.2
-0.4
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.2
+0.2
-0.2
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
-0.1
+0.1
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.3
+0.1
-0.2
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
+0.0
+0.1
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.0
+0.1
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
+0.0
+0.2
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.0
+0.1
+0.2
N.D.
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