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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF3533 and GFF3534 are separated by 61 nucleotides
GFF3534 and GFF3535 are separated by 34 nucleotides
GFF3535 and GFF3536 are separated by 156 nucleotides
GFF3536 and GFF3537 are separated by 155 nucleotides
GFF3533 - FIG00638687: hypothetical protein, at 284,851 to 285,564
GFF3533
GFF3534 - Selenoprotein O and cysteine-containing homologs, at 285,626 to 287,068
GFF3534
GFF3535 - Hemin uptake protein HemP, at 287,103 to 287,294
GFF3535
GFF3536 - 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54), at 287,451 to 288,497
GFF3536
GFF3537 - FIG137360: hypothetical protein, at 288,653 to 289,486
GFF3537
Group
Condition
GFF3533
GFF3534
GFF3535
GFF3536
GFF3537
phage
LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
-5.6
-0.2
N.D.
+1.5
+0.2
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI
-4.6
+0.2
N.D.
+1.3
+0.0
phage
LB_plus_SM_buffer with FelixO1_phage 0.05 MOI
-3.1
-0.1
N.D.
+1.1
-0.0
phage
LB_plus_SM_buffer with Ffm_phage 0.0001875 MOI
-1.5
-0.1
N.D.
-0.3
+0.0
phage
LB_plus_SM_buffer with 6F2_phage 0.001875 MOI
-1.0
-0.1
N.D.
-0.4
-0.3
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI
-2.9
+0.2
N.D.
+0.8
+0.1
phage
LB_plus_SM_buffer with EIP16_phage 8.75 MOI
-2.2
-0.1
N.D.
+0.6
-0.0
phage
LB_plus_SM_buffer with phi19h1_phage 0.001875 MOI
-0.8
+0.2
N.D.
-0.6
-0.2
phage
6F2_phage 15 MOI
-1.0
-0.1
N.D.
-0.3
-0.0
lb_plus_sm_buffer
LB_plus_SM_buffer
-1.0
+0.2
N.D.
-0.1
-0.4
phage
LB_plus_SM_buffer with Ffm_phage 0.001875 MOI
-0.8
-0.0
N.D.
-0.3
-0.2
phage
LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI
-0.1
-0.0
N.D.
-0.8
-0.3
phage
LB_plus_SM_buffer with 6F2_phage 0.01875 MOI
-0.8
-0.0
N.D.
-0.2
-0.3
phage
LB_plus_SM_buffer with Br60_phage 0.0000005 MOI
-0.2
+0.2
N.D.
-0.8
-0.4
phage
6H2_phage 10 MOI; agar plate assay
-1.3
-0.0
N.D.
+0.0
+0.0
phage
Br60_phage 15 MOI
-1.0
+0.1
N.D.
+0.0
-0.3
phage
LB_plus_SM_buffer with Br60_phage 0.00005 MOI
-0.8
+0.1
N.D.
-0.1
-0.5
phage
LB_plus_SM_buffer with Br60_phage 0.000005 MOI
-1.0
+0.2
N.D.
-0.1
-0.3
phage
LB_plus_SM_buffer with EIP16_phage 0.0875 MOI
-1.1
+0.1
N.D.
+0.2
-0.2
micoeukaryotes
C.elegans, mixed culture-1
-0.6
-0.1
N.D.
+0.3
-0.4
phage
LB_plus_SM_buffer with Br60_phage 0.0005 MOI
-0.6
+0.0
N.D.
-0.4
+0.3
lb_plus_sm_buffer
LB_plus_SM_buffer
-0.7
+0.0
N.D.
+0.4
-0.3
phage
LB_plus_SM_buffer with EIP16_phage 0.875 MOI
-1.1
+0.1
N.D.
+0.6
-0.0
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
-1.7
+0.2
N.D.
+0.9
+0.2
phage
LB_plus_SM_buffer with ES18h1_phage 0.75 MOI
+1.4
+0.2
N.D.
-0.9
-0.8
phage
LB_plus_SM_buffer with 6F2_phage 0.1875 MOI
+1.4
-0.2
N.D.
-0.1
-0.3
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
-0.5
+0.3
N.D.
+0.8
+0.3
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
-1.1
+0.5
N.D.
+1.2
+0.4
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
-1.0
+0.4
N.D.
+1.1
+0.5
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
+0.1
+0.2
N.D.
+0.5
+0.7
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