Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_17985	PS417_17990	PS417_17995	PS417_18000	PS417_18005
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.3	-0.8	-1.4	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.1	-0.9	-0.8	-0.1
soil	soil sample 7; outgrowth in LB	N.D.	+0.0	-1.1	-0.7	-0.0
soil	soil sample 5; outgrowth in LB	N.D.	-0.2	-0.6	-0.8	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.1	-1.2	-1.0	+0.6
stress	Gentamicin 0.008 mg/ml	N.D.	+0.0	-1.1	-0.4	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.2	-0.4	-1.1	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.2	-0.3	-1.0	-0.2
supernatant control	Vogels_fungal_media 0.1X	N.D.	-0.2	-1.1	+0.4	-0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.2	-0.4	-0.7	+0.2
phage	P. simiae OR1 MOI 0.1	N.D.	-0.4	+0.6	-0.9	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.2	+0.8	-0.8	-0.0
soil	soil sample 4; outgrowth in LB	N.D.	-0.2	+0.7	-0.6	-0.1
phage	JP1 MOI 10	N.D.	-0.0	-0.8	+0.8	-0.1
carbon source	2'-Deoxyinosine 5 mM (C)	N.D.	-0.5	-0.4	+1.2	-0.2
carbon source	2-Deoxy-D-Ribose 10 mM (C)	N.D.	-0.1	-0.4	+1.0	-0.2
carbon source	L-Valine (C)	N.D.	+0.5	+0.7	-0.8	+0.0
phage	JP1 MOI 10	N.D.	+0.0	-0.9	+1.1	+0.2
stress	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 2	N.D.	-0.2	-0.4	+0.7	+0.2
seeds	Growth on radish seeds for 72 hours	N.D.	-0.4	+0.6	-0.1	+0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	-0.1	+0.8	-0.3	+0.3
seeds	Growth on radish seeds for 72 hours	N.D.	-0.4	-0.0	+0.7	+0.4
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	N.D.	+0.3	-0.3	+1.0	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	N.D.	-0.0	+0.4	+1.0	+0.0
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	N.D.	+0.4	+0.5	+0.5	+0.1
stress	1-ethyl-3-methylimidazolium chloride 200 mM	N.D.	+0.3	+0.4	+0.7	+0.0
stress	Choline chloride 300 mM	N.D.	+0.4	-0.0	+1.0	+0.2
phage	JP1 MOI 1	N.D.	-0.0	+0.4	+1.1	+0.2
stress	Nickel (II) chloride 1 mM	N.D.	+1.6	+0.4	-0.1	+0.0
stress	Dimethyl Sulfoxide 5 vol%	N.D.	+0.3	+0.2	+1.6	+0.2