Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF3511 and GFF3512 are separated by 64 nucleotidesGFF3512 and GFF3513 are separated by 130 nucleotidesGFF3513 and GFF3514 overlap by 4 nucleotidesGFF3514 and GFF3515 are separated by 1 nucleotides GFF3511 - no description, at 17,174 to 18,160 GFF3511 GFF3512 - no description, at 18,225 to 18,578 GFF3512 GFF3513 - hypothetical protein, at 18,709 to 18,831 GFF3513 GFF3514 - no description, at 18,828 to 18,926 GFF3514 GFF3515 - Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1), at 18,928 to 20,727 GFF3515
Group Condition GFF3511 GFF3512 GFF3513 GFF3514 GFF3515
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.8 -0.2 N.D. -0.4 -0.2
complex community Community=guar; Passage=4 +1.0 -0.4 N.D. -2.3 +0.0
complex community Community=Kojac gum; Passage=4 -0.3 -0.4 N.D. -0.5 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.8 -0.0 N.D. -0.5 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.7 -0.2 N.D. -0.2 -0.4
complex community Community=guar; Passage=4 +0.4 +0.1 N.D. -1.2 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.0 N.D. -0.7 -0.4
complex community Community=guar; Passage=4 -0.5 -0.0 N.D. -0.4 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 -0.3 N.D. -0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 +0.1 N.D. -0.8 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.4 +0.3 N.D. -0.5 -0.2
complex community Community=Locust bean gum; Passage=1 -0.0 +0.1 N.D. -0.6 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.4 +0.3 N.D. -0.5 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.7 +0.2 N.D. -0.4 +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.6 +0.0 N.D. +0.3 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.4 +0.2 N.D. -0.1 -0.3
complex community Community=Locust bean gum; Passage=4 +0.1 -0.1 N.D. +0.2 -0.6
complex community Community=guar; Passage=4 +1.2 -0.8 N.D. -1.1 +0.3
vitamin M9 with Supernatant from Cyptococcus -0.4 -0.1 N.D. +0.4 -0.2
complex community Community=Locust bean gum; Passage=4 +0.7 +0.7 N.D. -1.4 -0.4
complex community Community=arabino-guar; Passage=4 +0.8 -0.2 N.D. -0.7 -0.1
complex community Community=Locust bean gum; Passage=4 +0.3 -0.1 N.D. -0.4 +0.2
vitamin M9 with Supernatant from Cyptococcus -0.4 -0.0 N.D. +0.7 -0.2
complex community Community=Locust bean gum; Passage=4 +0.6 +0.4 N.D. -0.7 -0.2
no phage control no phage control -0.2 +0.2 N.D. +0.5 -0.3
complex community Community=Kojac gum; Passage=1 +0.7 +0.1 N.D. -0.6 +0.1
complex community Community=arabino-guar; Passage=4 +0.9 +0.3 N.D. -0.2 -0.4
complex community Community=arabino-guar; Passage=4 +1.5 -0.1 N.D. +0.0 -0.7
phage phage_bap4 +0.4 +0.1 N.D. +0.4 -0.1
complex community Community=arabino-guar; Passage=4 +0.4 +0.1 N.D. +0.7 -0.2
remove
GFF3511
plot
remove
GFF3512
plot
remove
GFF3513
remove
GFF3514
plot
remove
GFF3515
plot