Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 552 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_01775	PS417_01780	PS417_01785	PS417_01790	PS417_01795
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.4	-0.8	N.D.	-4.3	-6.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.2	-1.5	N.D.	-2.3	-6.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	-1.5	N.D.	-2.6	-5.7
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.1	-0.6	N.D.	-2.8	-2.9
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.2	-0.1	N.D.	-2.4	-2.8
seeds	Growth on radish seeds for 72 hours	-0.0	-1.3	N.D.	-1.8	-2.2
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.0	-0.3	N.D.	-1.9	-2.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.1	-0.4	N.D.	-2.1	-2.5
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	-0.1	-0.3	N.D.	-1.7	-2.5
seeds	Growth on radish seeds for 72 hours	-0.2	+0.1	N.D.	-1.7	-2.1
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	+0.0	-0.3	N.D.	-1.7	-1.7
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	+0.2	-0.2	N.D.	-1.7	-2.0
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.0	+0.6	N.D.	-1.7	-2.3
root	root sample 6; outgrowth in LB	+0.1	-0.2	N.D.	-1.3	-2.0
liquid stress	Fraxetin 3 mM; liquid stress	-0.0	-0.6	N.D.	-1.3	-1.2
liquid stress	Fraxetin 3 mM; liquid stress	+0.0	-0.6	N.D.	-1.0	-1.5
seeds	Growth on radish seeds for 72 hours	+0.5	+0.3	N.D.	-1.7	-1.6
soil	soil sample 5; outgrowth in LB	-0.1	+0.6	N.D.	-1.0	-1.8
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.1	+1.5	N.D.	-1.5	-2.1
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-0.0	+1.1	N.D.	-1.1	-1.2
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.1	+1.7	N.D.	-1.4	-1.5
solid stress	Fraxetin 3 mM; solid stress	-0.3	-1.0	N.D.	+1.4	+1.4
phage	JP1 MOI 0.1	+0.1	-1.0	N.D.	+1.2	+1.3
solid stress	Fraxetin 3 mM; solid stress	-0.1	-0.6	N.D.	+1.5	+1.5
nitrogen source	Inosine (N)	-0.1	+0.4	N.D.	+1.9	+1.9
stress	nitrate 200 mM	+0.1	+0.1	N.D.	+2.2	+2.1
nitrogen source	Urea (N)	+0.1	+0.1	N.D.	+2.1	+2.2
phage	P. simiae OR1 MOI 0.1	-0.1	+0.6	N.D.	+2.0	+2.3
stress	1-ethyl-3-methylimidazolium chloride 200 mM	+0.1	+0.2	N.D.	+2.3	+2.4
nophagecontrol	Only library	+0.4	+0.2	N.D.	+2.5	+2.6