Fitness for 3 genes in Variovorax sp. SCN45

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500 ntGFF3495 and GFF3496 overlap by 4 nucleotidesGFF3496 and GFF3497 are separated by 117 nucleotides GFF3495 - ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate), at 222 to 1,055 GFF3495 GFF3496 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 1,052 to 2,974 GFF3496 GFF3497 - Transcriptional regulator, Crp/Fnr family, at 3,092 to 3,871 GFF3497
Group Condition GFF3495 GFF3496 GFF3497
complex community Community=Kojac gum; Passage=4 -5.1 -0.4 +0.2
complex community Community=Locust bean gum; Passage=4 -5.0 -0.2 +0.0
complex community Community=guar; Passage=4 -2.4 -0.3 +0.2
complex community Community=arabino-guar; Passage=4 -1.8 -0.6 +0.0
complex community Community=guar; Passage=4 -1.4 -0.1 +0.2
complex community Community=guar; Passage=4 -1.2 +0.0 +0.1
complex community Community=Locust bean gum; Passage=4 -0.7 -0.2 -0.0
vitamin M9 with Supernatant from Cyptococcus -0.6 -0.1 -0.1
complex community Community=arabino-guar; Passage=4 -0.6 -0.3 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.4 -0.1 -0.2
complex community Community=arabino-guar; Passage=4 -0.5 -0.5 +0.3
vitamin M9 with Supernatant from Cyptococcus -0.4 +0.0 -0.3
phage phage_bap4 -0.7 +0.0 +0.1
phage phage_bap4 -0.2 -0.1 -0.2
no phage control no phage control +0.0 -0.1 -0.4
complex community Community=arabino-guar; Passage=4 -0.3 -0.4 +0.3
phage phage_bap4 -0.4 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 +0.1 -0.2
complex community Community=Locust bean gum; Passage=1 -0.4 -0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 +0.1 -0.4
vitamin M9 with Supernatant from Cyptococcus +0.2 -0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.4 +0.0 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.4 +0.1 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.3 +0.1 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.6 +0.1 -0.3
complex community Community=Locust bean gum; Passage=4 +0.6 -0.3 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.8 -0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus +0.6 -0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +1.1 +0.1 -0.2
complex community Community=Locust bean gum; Passage=4 +1.2 -0.2 +0.2
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