Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_01770	PS417_01775	PS417_01780	PS417_01785	PS417_01790
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3	+0.4	-0.8	N.D.	-4.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	+0.1	-1.5	N.D.	-2.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.0	+0.2	-1.5	N.D.	-2.3
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.1	+0.1	-0.6	N.D.	-2.8
seeds	Growth on radish seeds for 72 hours	-0.0	-0.0	-1.3	N.D.	-1.8
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.3	-0.2	-0.1	N.D.	-2.4
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.0	-0.0	-0.3	N.D.	-1.9
liquid stress	Fraxetin 3 mM; liquid stress	-0.1	-0.0	-0.6	N.D.	-1.3
seeds	Growth on radish seeds for 72 hours	-0.3	-0.2	+0.1	N.D.	-1.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.4	+0.1	-0.4	N.D.	-2.1
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	+0.3	-0.1	-0.3	N.D.	-1.7
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	+0.2	+0.2	-0.2	N.D.	-1.7
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.1	-0.0	+0.6	N.D.	-1.7
seeds	Growth on radish seeds for 72 hours	-0.2	+0.5	+0.3	N.D.	-1.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.3	-0.1	-1.4	N.D.	+0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.7	+0.2	+0.0	N.D.	-1.4
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.1	-0.1	+1.5	N.D.	-1.5
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	+0.0	-0.0	+1.1	N.D.	-1.1
phage	JP1 MOI 0.1	-0.2	+0.1	-1.0	N.D.	+1.2
solid stress	Fraxetin 3 mM; solid stress	+0.1	-0.3	-1.0	N.D.	+1.4
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.3	+0.1	+1.7	N.D.	-1.4
solid stress	Fraxetin 3 mM; solid stress	+0.1	-0.1	-0.6	N.D.	+1.5
carbon source	Gly-Glu (C)	-0.1	-0.4	+1.3	N.D.	+0.7
carbon source	Gly-Glu (C)	-0.0	-0.2	+1.3	N.D.	+0.6
nitrogen source	Inosine (N)	-0.1	-0.1	+0.4	N.D.	+1.9
nitrogen source	Urea (N)	+0.0	+0.1	+0.1	N.D.	+2.1
stress	nitrate 200 mM	+0.1	+0.1	+0.1	N.D.	+2.2
phage	P. simiae OR1 MOI 0.1	-0.1	-0.1	+0.6	N.D.	+2.0
stress	1-ethyl-3-methylimidazolium chloride 200 mM	+0.2	+0.1	+0.2	N.D.	+2.3
nophagecontrol	Only library	+0.4	+0.4	+0.2	N.D.	+2.5