Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3487 and GFF3488 are separated by 262 nucleotidesGFF3488 and GFF3489 are separated by 86 nucleotidesGFF3489 and GFF3490 are separated by 12 nucleotidesGFF3490 and GFF3491 are separated by 107 nucleotides GFF3487 - InterPro IPR005806 COGs COG2146, at 309,568 to 310,902 GFF3487 GFF3488 - Transcriptional regulator, GntR family, at 311,165 to 311,899 GFF3488 GFF3489 - Transcriptional regulator, AcrR family, at 311,986 to 312,603 GFF3489 GFF3490 - Putative amidase R03093, at 312,616 to 314,112 GFF3490 GFF3491 - Ser/Thr protein phosphatase family protein, at 314,220 to 315,026 GFF3491
Group Condition GFF3487 GFF3488 GFF3489 GFF3490 GFF3491
complex community Community=arabino-guar; Passage=4 -0.2 -0.5 -0.5 +0.1 -0.3
complex community Community=arabino-guar; Passage=4 +0.0 -1.1 -0.3 -0.1 +0.1
complex community Community=arabino-guar; Passage=4 -0.0 -0.8 -0.6 +0.3 -0.0
vitamin M9 with Supernatant from Cyptococcus -0.0 -0.6 -0.2 +0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 -0.4 -0.2 -0.0 -0.2
complex community Community=arabino-guar; Passage=4 +0.2 -0.9 -0.1 +0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 -0.8 +0.2 +0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 -0.4 -0.0 -0.1 -0.1
complex community Community=guar; Passage=4 +0.1 -0.5 +0.0 +0.0 -0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.0 -0.5 +0.0 -0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 -0.3 -0.1 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 -0.4 -0.1 +0.0 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.4 +0.1 +0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.0 -0.4 -0.1 +0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus +0.0 -0.1 -0.3 -0.1 +0.1
complex community Community=guar; Passage=4 +0.0 -0.6 +0.4 +0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 -0.2 +0.0 +0.0 -0.1
complex community Community=guar; Passage=4 -0.1 -0.3 -0.1 +0.1 +0.4
complex community Community=Locust bean gum; Passage=4 -0.2 +0.1 +0.2 -0.1 +0.1
complex community Community=Locust bean gum; Passage=4 -0.3 +0.0 +0.5 -0.0 -0.1
complex community Community=Locust bean gum; Passage=4 -0.3 +0.2 +0.5 -0.1 +0.0
complex community Community=Locust bean gum; Passage=4 -0.1 -0.3 +0.6 +0.1 +0.1
complex community Community=Kojac gum; Passage=4 -0.0 -0.1 +0.5 +0.2 -0.3
no phage control no phage control +0.1 +0.2 -0.1 +0.1 +0.1
complex community Community=Locust bean gum; Passage=1 +0.1 +0.3 -0.1 +0.1 -0.0
complex community Community=guar; Passage=4 -0.2 +0.2 +0.1 +0.2 +0.2
phage phage_bap4 +0.1 -0.1 +0.3 +0.1 +0.2
phage phage_bap4 +0.1 +0.1 +0.2 +0.1 -0.0
phage phage_bap4 +0.1 +0.3 -0.0 +0.1 +0.1
phage phage_bap4 +0.2 +0.1 +0.2 +0.1 +0.1
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