Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3484 and GFF3485 are separated by 95 nucleotidesGFF3485 and GFF3486 are separated by 19 nucleotidesGFF3486 and GFF3487 are separated by 10 nucleotidesGFF3487 and GFF3488 are separated by 262 nucleotides GFF3484 - ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate), at 306,477 to 307,670 GFF3484 GFF3485 - Ferredoxin, 2Fe-2S, at 307,766 to 308,089 GFF3485 GFF3486 - glutamine synthetase family protein, at 308,109 to 309,557 GFF3486 GFF3487 - InterPro IPR005806 COGs COG2146, at 309,568 to 310,902 GFF3487 GFF3488 - Transcriptional regulator, GntR family, at 311,165 to 311,899 GFF3488
Group Condition GFF3484 GFF3485 GFF3486 GFF3487 GFF3488
complex community Community=guar; Passage=4 -0.2 -1.9 +0.2 -0.1 -0.3
complex community Community=Locust bean gum; Passage=4 +0.2 -1.3 -0.5 -0.3 +0.0
complex community Community=arabino-guar; Passage=4 -0.4 -0.3 +0.0 +0.0 -1.1
complex community Community=guar; Passage=4 -0.1 -0.6 -0.3 +0.1 -0.5
complex community Community=Locust bean gum; Passage=4 -0.1 -1.0 -0.2 -0.3 +0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 -1.1 -0.1 -0.1 -0.1
complex community Community=arabino-guar; Passage=4 -0.1 -0.1 -0.3 -0.0 -0.8
complex community Community=arabino-guar; Passage=4 -0.0 -0.1 -0.3 +0.2 -0.9
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 -0.3 -0.0 +0.0 -0.8
complex community Community=Locust bean gum; Passage=4 +0.0 -0.6 -0.1 -0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.2 -0.1 -0.0 -0.6
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.2 -0.2 -0.0 -0.3
complex community Community=Kojac gum; Passage=1 +0.0 -0.5 +0.0 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.3 -0.2 +0.0 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.3 -0.0 +0.1 -0.4
complex community Community=guar; Passage=4 +0.1 -0.7 +0.3 -0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 +0.3 +0.1 -0.1 -0.4
complex community Community=guar; Passage=4 +0.0 +0.3 +0.1 +0.0 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 +0.1 +0.1 -0.0 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 +0.4 +0.1 +0.0 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 +0.5 -0.2 +0.2 -0.2
complex community Community=Locust bean gum; Passage=1 +0.0 -0.3 +0.1 +0.1 +0.3
complex community Community=arabino-guar; Passage=4 +0.0 +1.3 -0.2 -0.2 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.7 -0.0 -0.0 -0.0
phage phage_bap4 -0.0 +0.6 -0.1 +0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.6 -0.0 +0.1 -0.2
phage phage_bap4 -0.1 +0.3 +0.1 +0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 +0.5 +0.1 +0.1 -0.0
no phage control no phage control +0.1 +0.6 +0.0 +0.1 -0.0
complex community Community=Kojac gum; Passage=4 -0.1 +0.9 +0.1 -0.0 -0.1
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