Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF346 and GFF347 are separated by 101 nucleotidesGFF347 and GFF348 are separated by 69 nucleotidesGFF348 and GFF349 are separated by 49 nucleotidesGFF349 and GFF350 are separated by 229 nucleotides GFF346 - hypothetical protein, at 379,903 to 380,097 GFF346 GFF347 - Exported protein, at 380,199 to 380,657 GFF347 GFF348 - Superoxide dismutase [Fe] (EC 1.15.1.1), at 380,727 to 381,308 GFF348 GFF349 - Exodeoxyribonuclease VII large subunit (EC 3.1.11.6), at 381,358 to 382,755 GFF349 GFF350 - Ferric siderophore transport system, biopolymer transport protein ExbB, at 382,985 to 383,617 GFF350
Group Condition GFF346 GFF347 GFF348 GFF349 GFF350
complex community Community=Kojac gum; Passage=4 N.D. -1.1 -0.4 -0.5 -0.4
complex community Community=arabino-guar; Passage=4 N.D. -0.1 -0.1 -0.4 -1.0
complex community Community=Locust bean gum; Passage=4 N.D. -0.5 -0.2 -0.3 -0.1
complex community Community=arabino-guar; Passage=4 N.D. -0.5 -0.2 -0.2 -0.2
complex community Community=guar; Passage=4 N.D. -0.5 +0.0 -0.3 -0.3
complex community Community=Locust bean gum; Passage=4 N.D. -0.2 -0.0 -0.1 -0.4
complex community Community=arabino-guar; Passage=4 N.D. -0.5 +0.3 -0.5 +0.1
no phage control no phage control N.D. -0.3 +0.1 -0.1 -0.2
complex community Community=Locust bean gum; Passage=4 N.D. -0.3 -0.2 -0.3 +0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.4 +0.1 +0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.2 -0.1 -0.2 +0.3
complex community Community=guar; Passage=4 N.D. +0.3 -0.3 -0.2 -0.1
complex community Community=Locust bean gum; Passage=4 N.D. +0.1 -0.2 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.2 +0.1 -0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.3 +0.1 -0.0 +0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. -0.2 +0.1 +0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.2 +0.2 -0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus N.D. -0.1 +0.2 +0.0 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.1 +0.1 -0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus N.D. -0.2 +0.1 -0.1 +0.3
phage phage_bap4 N.D. -0.1 -0.0 -0.2 +0.5
phage phage_bap4 N.D. +0.2 +0.1 -0.1 +0.1
complex community Community=Kojac gum; Passage=1 N.D. +0.0 +0.1 -0.0 +0.3
phage phage_bap4 N.D. +0.1 +0.2 -0.1 +0.1
complex community Community=guar; Passage=4 N.D. +0.2 -0.1 -0.1 +0.4
phage phage_bap4 N.D. -0.2 +0.0 -0.2 +0.9
complex community Community=guar; Passage=4 N.D. +0.7 -0.1 -0.2 +0.2
phage phage_bap4 N.D. -0.1 +0.1 -0.0 +0.7
phage phage_bap4 N.D. +0.2 +0.2 -0.1 +0.5
complex community Community=arabino-guar; Passage=4 N.D. +1.0 -0.3 -0.2 +0.7
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