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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF3472 and GFF3473 are separated by 110 nucleotides
GFF3473 and GFF3474 are separated by 73 nucleotides
GFF3474 and GFF3475 overlap by 19 nucleotides
GFF3475 and GFF3476 are separated by 85 nucleotides
GFF3472 - Nitrilotriacetate monooxygenase component B (EC 1.14.13.-), at 292,318 to 292,761
GFF3472
GFF3473 - no description, at 292,872 to 293,801
GFF3473
GFF3474 - Alkyl sulfatase and related hydrolases, MBL-fold metallo-hydrolase superfamily, at 293,875 to 295,866
GFF3474
GFF3475 - Gate supefamily SpmA/SpmB domains protein, at 295,848 to 297,077
GFF3475
GFF3476 - Cardiolipin synthase (EC 2.7.8.-) phosphatidylethanolamine-utilizing, bacterial type ClsC, at 297,163 to 298,746
GFF3476
Group
Condition
GFF3472
GFF3473
GFF3474
GFF3475
GFF3476
complex community
Community=guar; Passage=4
-1.9
-0.9
-0.1
+0.1
-0.1
complex community
Community=guar; Passage=4
-2.1
-0.1
+0.2
+0.2
-0.1
complex community
Community=Locust bean gum; Passage=4
-2.3
+0.4
+0.1
+0.0
-0.1
complex community
Community=arabino-guar; Passage=4
-1.4
-0.2
+0.0
-0.0
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.4
-0.3
+0.0
-0.2
-0.2
complex community
Community=arabino-guar; Passage=4
-1.1
-0.2
+0.2
+0.1
+0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.5
+0.5
-0.1
-0.1
-0.2
complex community
Community=arabino-guar; Passage=4
-0.3
+0.2
+0.1
+0.0
-0.4
complex community
Community=guar; Passage=4
+0.2
-0.8
-0.1
+0.0
+0.3
complex community
Community=guar; Passage=4
-0.0
-0.9
+0.0
+0.0
+0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.4
+0.2
+0.1
-0.3
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.2
-0.4
+0.1
-0.1
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.4
-0.3
-0.1
-0.1
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.0
+0.4
-0.1
-0.2
-0.2
complex community
Community=Locust bean gum; Passage=4
+0.6
-1.3
-0.0
+0.4
+0.2
complex community
Community=arabino-guar; Passage=4
-0.2
-0.1
+0.2
+0.4
-0.1
vitamin
M9 with Supernatant from Cyptococcus
-0.3
+0.3
+0.1
+0.1
+0.1
vitamin
M9 with Supernatant from Cyptococcus
-0.2
+0.6
-0.1
+0.1
+0.0
phage
phage_bap4
+0.4
+0.2
+0.1
-0.1
-0.0
no phage control
no phage control
+0.6
+0.2
-0.0
+0.0
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.1
+0.5
-0.0
-0.1
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.6
+0.1
+0.0
-0.1
+0.2
phage
phage_bap4
+0.7
+0.2
+0.1
-0.1
-0.0
phage
phage_bap4
+0.6
+0.2
-0.0
+0.1
+0.0
complex community
Community=Locust bean gum; Passage=4
+1.2
-0.3
+0.2
-0.0
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.4
+0.3
+0.1
+0.1
+0.1
phage
phage_bap4
+0.7
+0.2
+0.0
+0.0
+0.0
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.7
+0.5
-0.1
-0.1
+0.1
complex community
Community=Kojac gum; Passage=4
+1.3
-0.8
+0.1
+0.3
+0.1
complex community
Community=Locust bean gum; Passage=4
+0.9
+0.4
-0.1
+0.3
+0.4
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