Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_17775	PS417_17780	PS417_17785	PS417_17790	PS417_17795
stress	Polymyxin B sulfate 0.006 mg/ml	N.D.	-1.1	-6.2	-0.3	+0.3
soil	soil sample 7; outgrowth in LB	N.D.	-3.4	-0.6	-0.2	-1.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.6	-0.2	+0.1	-6.6
soil	soil sample 5; outgrowth in LB	N.D.	-2.2	-0.0	-0.0	-3.5
soil	soil sample 4; outgrowth in LB	N.D.	-3.2	-0.7	-0.6	-0.8
carbon source	L-Valine (C)	N.D.	-0.4	+0.1	+0.2	-4.9
carbon source	2'-Deoxyinosine 5 mM (C)	N.D.	-1.5	+0.3	-0.2	-3.1
root	root sample 6; outgrowth in LB	N.D.	-2.1	-0.9	+0.8	-1.8
stress	Aluminum chloride 4 mM	N.D.	-2.3	-0.4	+0.0	-0.3
rhizosphere	rhizosphere sample 1; outgrowth in LB	N.D.	-0.9	-1.1	+0.3	-1.2
soil	soil sample 2; outgrowth in LB	N.D.	-1.5	-0.6	-0.9	+0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	-3.1	+0.1	-0.0	+1.0
phage	P. simiae Grant Run MOI 0.1	N.D.	-2.2	-0.3	+0.4	+0.2
seeds	Growth on radish seeds for 72 hours	N.D.	+0.4	+0.2	+0.1	-2.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-1.8	-0.4	+0.4	+0.5
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB	N.D.	+1.2	+0.4	-0.2	-2.5
seeds	Growth on radish seeds for 72 hours	N.D.	+0.9	-0.2	-0.6	-1.2
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	-1.8	+0.4	+0.5	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	N.D.	-1.4	+0.2	-0.6	+1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+1.0	+0.1	-0.4	-1.4
phage	JP1 MOI 10	N.D.	-1.9	+0.1	+0.5	+0.7
carbon source	Carbon source L-Ornithine 10 mM	N.D.	-1.8	+0.0	+0.2	+1.0
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	-1.6	+0.2	-0.1	+1.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	N.D.	-0.8	-0.1	+0.4	+2.2
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	N.D.	+1.0	-0.5	+0.4	+1.5
solid stress	Fraxetin 3 mM; solid stress	N.D.	+0.9	+1.6	+0.4	+0.2
solid stress	Fraxetin 3 mM; solid stress	N.D.	+1.1	+2.2	+0.2	+0.2
solid stress	Fraxetin 3 mM; solid stress	N.D.	+1.3	+2.0	+0.2	+0.2
solid stress	Fraxetin 3 mM; solid stress	N.D.	+1.5	+2.4	+0.3	-0.2
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	N.D.	+3.8	-0.3	-0.3	+1.2