Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF3471 and GFF3472 overlap by 4 nucleotidesGFF3472 and GFF3473 are separated by 110 nucleotidesGFF3473 and GFF3474 are separated by 73 nucleotidesGFF3474 and GFF3475 overlap by 19 nucleotides GFF3471 - hypothetical protein, at 291,821 to 292,321 GFF3471 GFF3472 - Nitrilotriacetate monooxygenase component B (EC 1.14.13.-), at 292,318 to 292,761 GFF3472 GFF3473 - no description, at 292,872 to 293,801 GFF3473 GFF3474 - Alkyl sulfatase and related hydrolases, MBL-fold metallo-hydrolase superfamily, at 293,875 to 295,866 GFF3474 GFF3475 - Gate supefamily SpmA/SpmB domains protein, at 295,848 to 297,077 GFF3475
Group Condition GFF3471 GFF3472 GFF3473 GFF3474 GFF3475
complex community Community=arabino-guar; Passage=4 -1.4 -1.4 -0.2 +0.0 -0.0
complex community Community=Locust bean gum; Passage=4 -0.4 -2.3 +0.4 +0.1 +0.0
complex community Community=guar; Passage=4 +0.7 -1.9 -0.9 -0.1 +0.1
complex community Community=guar; Passage=4 +0.5 -2.1 -0.1 +0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.5 -0.4 -0.3 +0.0 -0.2
complex community Community=Locust bean gum; Passage=4 -0.8 +0.6 -1.3 -0.0 +0.4
phage phage_bap4 -0.3 -0.5 -0.2 +0.0 -0.0
complex community Community=guar; Passage=4 -0.3 +0.2 -0.8 -0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 -0.1 -0.2 +0.1 -0.2
complex community Community=guar; Passage=4 +0.2 -0.0 -0.9 +0.0 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 +0.2 -0.4 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.5 +0.5 -0.1 -0.1
complex community Community=arabino-guar; Passage=4 -0.7 -0.2 -0.1 +0.2 +0.4
complex community Community=arabino-guar; Passage=4 +0.7 -1.1 -0.2 +0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 -0.4 +0.2 +0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.2 -0.4 +0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.4 -0.3 -0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus -0.4 -0.2 +0.6 -0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.3 +0.3 +0.1 +0.1
no phage control no phage control -0.3 +0.4 +0.1 +0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 +0.6 +0.1 +0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.1 +0.5 -0.0 -0.1
phage phage_bap4 -0.1 +0.4 +0.2 +0.1 -0.1
complex community Community=Kojac gum; Passage=4 -0.5 +1.3 -0.8 +0.1 +0.3
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 +0.7 +0.5 -0.1 -0.1
phage phage_bap4 -0.1 +0.7 +0.2 +0.0 +0.0
phage phage_bap4 +0.0 +0.6 +0.2 -0.0 +0.1
phage phage_bap4 +0.0 +0.7 +0.2 +0.1 -0.1
complex community Community=Locust bean gum; Passage=4 +0.0 +1.2 -0.3 +0.2 -0.0
complex community Community=Locust bean gum; Passage=4 -0.1 +0.9 +0.4 -0.1 +0.3
remove
GFF3471
plot		 remove
GFF3472
plot		 remove
GFF3473		 remove
GFF3474
plot		 remove
GFF3475
plot