Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3454 and GFF3455 are separated by 15 nucleotidesGFF3455 and GFF3456 are separated by 2 nucleotidesGFF3456 and GFF3457 are separated by 49 nucleotidesGFF3457 and GFF3458 overlap by 4 nucleotides GFF3454 - Cys regulon transcriptional activator CysB, at 275,982 to 276,872 GFF3454 GFF3455 - Two component response regulator associated with urea and amide use, at 276,888 to 277,538 GFF3455 GFF3456 - Possible regulatory protein similar to urea ABC transporter, substrate binding protein, at 277,541 to 278,695 GFF3456 GFF3457 - Nitric oxide reductase activation protein NorD, at 278,745 to 280,397 GFF3457 GFF3458 - Rubisco activation protein CbbQ, at 280,394 to 281,212 GFF3458
Group Condition GFF3454 GFF3455 GFF3456 GFF3457 GFF3458
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 -1.6 -0.1 -0.2 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.4 -0.2 -0.3 -0.2 -0.4
vitamin M9 with Supernatant from Cyptococcus +0.2 -0.3 -0.5 -0.1 -0.6
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.3 -0.1 +0.1 -0.6
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 -0.4 -0.5 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.8 -0.1 +0.0 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 -1.0 -0.1 -0.2 +0.2
complex community Community=Kojac gum; Passage=1 -0.2 -0.0 +0.3 -0.4 -0.4
vitamin M9 with Supernatant from Cyptococcus +0.2 -0.8 -0.1 +0.2 -0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 -0.4 -0.2 -0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 -0.4 +0.2 +0.0 -0.4
complex community Community=arabino-guar; Passage=4 -0.1 -0.6 +0.4 +0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.6 +0.1 +0.0 +0.3
vitamin M9 with Supernatant from Cyptococcus +0.4 -0.7 -0.1 +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.3 -0.1 +0.2 +0.1 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.5 +0.2 -0.2 -0.0 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.3 -0.6 +0.2 +0.0 +0.1
complex community Community=arabino-guar; Passage=4 -0.3 -1.3 +1.2 -0.1 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.3 -0.7 +0.1 +0.2 +0.2
complex community Community=Locust bean gum; Passage=4 -0.5 +0.5 +0.4 -0.1 -0.1
complex community Community=Locust bean gum; Passage=4 -0.2 -0.5 +0.4 +0.1 +0.9
complex community Community=guar; Passage=4 +0.3 -1.4 +1.3 -0.1 +0.7
complex community Community=Locust bean gum; Passage=4 +0.8 +0.1 +0.0 -0.2 +0.4
complex community Community=guar; Passage=4 +0.0 -0.5 +1.6 -0.2 +0.8
complex community Community=arabino-guar; Passage=4 -0.3 +0.5 +1.2 -0.3 +0.7
complex community Community=Kojac gum; Passage=4 +0.7 +0.1 +2.3 -0.0 -0.9
complex community Community=guar; Passage=4 +0.8 +0.8 +1.1 +0.0 -0.3
complex community Community=Locust bean gum; Passage=4 +0.6 +1.0 +0.1 +0.1 +0.7
complex community Community=arabino-guar; Passage=4 +0.1 +0.2 +1.6 +0.3 +0.4
complex community Community=guar; Passage=4 +0.5 +0.1 +1.7 -0.3 +0.7
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