Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3452 and GFF3453 are separated by 64 nucleotidesGFF3453 and GFF3454 are separated by 124 nucleotidesGFF3454 and GFF3455 are separated by 15 nucleotidesGFF3455 and GFF3456 are separated by 2 nucleotides GFF3452 - hypothetical protein, at 273,925 to 275,598 GFF3452 GFF3453 - hypothetical protein, at 275,663 to 275,857 GFF3453 GFF3454 - Cys regulon transcriptional activator CysB, at 275,982 to 276,872 GFF3454 GFF3455 - Two component response regulator associated with urea and amide use, at 276,888 to 277,538 GFF3455 GFF3456 - Possible regulatory protein similar to urea ABC transporter, substrate binding protein, at 277,541 to 278,695 GFF3456
Group Condition GFF3452 GFF3453 GFF3454 GFF3455 GFF3456
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 N.D. -0.0 -1.6 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.4 N.D. +0.0 -0.4 -0.5
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 N.D. -0.4 -0.2 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 N.D. -0.1 -0.8 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 N.D. +0.2 -1.0 -0.1
vitamin M9 with Supernatant from Cyptococcus -0.1 N.D. +0.2 -0.8 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.0 N.D. -0.1 -0.6 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.0 N.D. +0.2 -0.3 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 N.D. +0.3 -0.6 +0.2
vitamin M9 with Supernatant from Cyptococcus +0.1 N.D. +0.4 -0.7 -0.1
complex community Community=arabino-guar; Passage=4 +0.1 N.D. -0.3 -1.3 +1.2
complex community Community=arabino-guar; Passage=4 +0.1 N.D. -0.1 -0.6 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.3 N.D. +0.3 -0.7 +0.1
complex community Community=Locust bean gum; Passage=4 +0.3 N.D. -0.2 -0.5 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 N.D. +0.3 -0.4 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 N.D. +0.1 -0.3 +0.2
phage phage_bap4 +0.0 N.D. +0.3 +0.3 -0.2
complex community Community=Kojac gum; Passage=1 +0.3 N.D. -0.2 -0.0 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 N.D. +0.5 +0.2 -0.2
complex community Community=guar; Passage=4 +0.3 N.D. +0.3 -1.4 +1.3
complex community Community=Locust bean gum; Passage=4 -0.1 N.D. +0.8 +0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.3 N.D. +0.2 +0.2 +0.2
complex community Community=Locust bean gum; Passage=4 +0.4 N.D. -0.5 +0.5 +0.4
complex community Community=guar; Passage=4 +0.0 N.D. +0.0 -0.5 +1.6
complex community Community=arabino-guar; Passage=4 -0.1 N.D. -0.3 +0.5 +1.2
complex community Community=arabino-guar; Passage=4 +0.4 N.D. +0.1 +0.2 +1.6
complex community Community=Locust bean gum; Passage=4 +0.6 N.D. +0.6 +1.0 +0.1
complex community Community=guar; Passage=4 +0.7 N.D. +0.5 +0.1 +1.7
complex community Community=Kojac gum; Passage=4 -0.0 N.D. +0.7 +0.1 +2.3
complex community Community=guar; Passage=4 +0.4 N.D. +0.8 +0.8 +1.1
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