Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3450 and GFF3451 are separated by 16 nucleotidesGFF3451 and GFF3452 are separated by 16 nucleotidesGFF3452 and GFF3453 are separated by 64 nucleotidesGFF3453 and GFF3454 are separated by 124 nucleotides GFF3450 - Transcriptional regulator, LacI family, at 272,510 to 273,544 GFF3450 GFF3451 - no description, at 273,561 to 273,908 GFF3451 GFF3452 - hypothetical protein, at 273,925 to 275,598 GFF3452 GFF3453 - hypothetical protein, at 275,663 to 275,857 GFF3453 GFF3454 - Cys regulon transcriptional activator CysB, at 275,982 to 276,872 GFF3454
Group Condition GFF3450 GFF3451 GFF3452 GFF3453 GFF3454
complex community Community=Locust bean gum; Passage=4 -3.4 -4.5 +0.6 N.D. +0.6
complex community Community=Locust bean gum; Passage=4 -2.6 -1.8 -0.1 N.D. +0.8
complex community Community=Kojac gum; Passage=4 -0.5 -2.8 -0.0 N.D. +0.7
complex community Community=Locust bean gum; Passage=4 -0.7 -1.9 +0.4 N.D. -0.5
vitamin M9 with calcium pantothenate 10 mg/mL -0.6 -2.0 +0.3 N.D. +0.2
complex community Community=arabino-guar; Passage=4 +0.0 -2.0 +0.1 N.D. -0.1
complex community Community=arabino-guar; Passage=4 -0.8 -0.6 -0.1 N.D. -0.3
phage phage_bap4 -0.2 -1.5 +0.1 N.D. +0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.4 -0.9 -0.0 N.D. -0.1
complex community Community=arabino-guar; Passage=4 -1.9 +0.8 +0.1 N.D. -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.8 -0.5 -0.1 N.D. +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -1.0 +0.2 -0.1 N.D. -0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 -0.7 +0.1 N.D. -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.6 -0.3 +0.1 N.D. -0.1
complex community Community=guar; Passage=4 -1.3 -0.2 +0.3 N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.5 -0.5 +0.0 N.D. +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 -0.8 -0.0 N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.7 -0.1 -0.2 N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -1.0 +0.0 N.D. +0.1
complex community Community=Locust bean gum; Passage=4 -0.8 +0.3 +0.3 N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.7 +0.6 +0.0 N.D. -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.8 +0.3 -0.0 N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.5 +0.1 -0.2 N.D. +0.3
complex community Community=guar; Passage=4 -1.0 -0.1 +0.7 N.D. +0.5
complex community Community=guar; Passage=4 -0.2 -0.7 +0.4 N.D. +0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.8 +0.4 +0.3 N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.6 +0.5 +0.2 N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.4 +0.6 +0.1 N.D. +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.4 +0.6 +0.3 N.D. +0.1
complex community Community=arabino-guar; Passage=4 -0.6 +1.1 +0.4 N.D. +0.1
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