Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3439 and GFF3440 are separated by 60 nucleotidesGFF3440 and GFF3441 are separated by 5 nucleotidesGFF3441 and GFF3442 are separated by 86 nucleotidesGFF3442 and GFF3443 are separated by 6 nucleotides GFF3439 - L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17), at 262,230 to 263,612 GFF3439 GFF3440 - FIG00460300: hypothetical protein, at 263,673 to 264,503 GFF3440 GFF3441 - Hypothetical protein VC0266 (sugar utilization related?), at 264,509 to 265,087 GFF3441 GFF3442 - RidA/YER057c/UK114 superfamily protein, at 265,174 to 265,578 GFF3442 GFF3443 - hypothetical protein, at 265,585 to 267,348 GFF3443
Group Condition GFF3439 GFF3440 GFF3441 GFF3442 GFF3443
complex community Community=Locust bean gum; Passage=4 -0.5 -0.1 -0.6 -0.2 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 -0.1 -0.4 -0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus -0.3 -0.1 -0.3 -0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.0 -0.0 -0.3 +0.0 -0.3
complex community Community=guar; Passage=4 -0.3 -0.4 +0.1 -0.3 +0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.3 -0.3 +0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 +0.1 -0.1 +0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.0 -0.3 -0.2 +0.2
complex community Community=Locust bean gum; Passage=4 -0.2 -0.8 +0.7 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.0 -0.3 +0.1 +0.1
complex community Community=arabino-guar; Passage=4 +0.2 -0.8 +0.3 +0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 -0.2 -0.2 +0.0 +0.1
phage phage_bap4 -0.1 +0.2 -0.2 +0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.4 +0.0 +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 -0.1 -0.3 +0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.1 -0.4 +0.1 -0.0
complex community Community=Locust bean gum; Passage=4 +0.0 +0.0 +0.0 -0.4 +0.2
complex community Community=Locust bean gum; Passage=4 -0.4 +0.4 -0.4 +0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.1 +0.2 -0.2 +0.2 -0.1
complex community Community=arabino-guar; Passage=4 -0.4 +0.1 +0.4 -0.2 +0.1
phage phage_bap4 +0.1 +0.3 -0.2 +0.1 -0.1
phage phage_bap4 +0.1 -0.1 +0.3 -0.0 +0.1
complex community Community=arabino-guar; Passage=4 -0.2 +0.4 +0.2 -0.0 +0.1
phage phage_bap4 +0.1 +0.3 +0.2 +0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 +0.1 +0.1 +0.2 +0.1
complex community Community=guar; Passage=4 +0.3 -0.0 +0.1 +0.3 -0.1
phage phage_bap4 +0.1 +0.3 +0.2 +0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.4 +0.1 -0.0 +0.2 +0.1
complex community Community=guar; Passage=4 -0.2 -0.2 +0.5 +0.3 +0.3
complex community Community=guar; Passage=4 +0.2 +0.4 +0.1 +0.2 -0.2
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